Gene Svir_17090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_17090 
Symbol 
ID8387041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1759850 
End bp1760938 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content60% 
IMG OID644975785 
Producthypothetical protein 
Protein accessionYP_003133567 
Protein GI257055735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.385932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGCTG CGCAAAGAAC ACCACTCCTC GCGGTCAAAA GCAAAGAAGG TGAACTGCAA 
GCCCTTCTCA ACACCACCGA AGTGAACGAC CGTGTGCAAG TCATGGTCGA ATTACTCGAC
AGCGTGGATT CGGGCGGGCT GGTCATCAAG AAGGTCGTTG ACTTCTGTGT CGAATCCGCT
TCGCGAGGTC GTCCGGTCTG GGTCGACACG ACGTGGTTGA CCAGGGCCAG TGACTTGGGT
GCCTCACCCC GAGCGGTACT CGAGCGTCTC GAACACGAGA TCGAGGAAAG CCTTGGTCTT
TTCTCGATCT GCTCAGAACA ACCGTGCTTG ATCCCGGTCG TCCCGCTGAA CACCGATGAC
GAGGGACTTC GCGCGATACG GATGTTCCTG GAACATCGAA GGCGTCCCGT CGTCGTCCGT
TGTCGGCAGA CCAGCCTGCC GACAACGGAG CTACTGCGGA CACTGGATCG GATCGCGACG
GCACTGCGAC TCGGGACCGA CGAGTTGCAC TTGGTCTTCG ACGAAGGGTA TGTGAGGAAA
CTCGAGACAC ATCGCGTCGA TGCTCTTGTC GACAACATCA CCGGACTGGC GAACCGGAAC
GAATACGCCT CGGTCGCGGT GTTGGCCGGT TCGACGCCAC GGAAACGCGG TGGTTACGAG
ACACATCTCC GCCGACGCGT CGAGGTGGAG CTGTGGAAGG CCGTGCGGGA GGCGAGTGGC
GAACGCATCC GGTACGGGGA TTACGGAGTC GTTCATCCTG ATCCCCAAAA ATCGAGCAAG
GGAGGGAGGA TACCCAACCC TTACATCTAT TACACCGTTC CGGGAGCGAC GCTGTACATC
GCCCGCAAGA ACCCAGAGCG CAAAGGGAAC TCGGTACCAC CGGGATCCAC CGAACGGTAC
TTCCTCAAAG TCGCCGACGA ACTCGTGCAT CGGCCCGAAT TCGCCGGTGC CGACTTCTCG
TGGGGTGACC GAAACCTCTA CACTTGCCGC AAACGACCGA ACCCACAGGT GGGCAGCGCA
TCGAGGTGGA TCGCGTTCGC CACCTCGCAC CATGTGGTGC ATGTGTCGAG ATCTCTGGAC
ACACCGTGA
 
Protein sequence
MSAAQRTPLL AVKSKEGELQ ALLNTTEVND RVQVMVELLD SVDSGGLVIK KVVDFCVESA 
SRGRPVWVDT TWLTRASDLG ASPRAVLERL EHEIEESLGL FSICSEQPCL IPVVPLNTDD
EGLRAIRMFL EHRRRPVVVR CRQTSLPTTE LLRTLDRIAT ALRLGTDELH LVFDEGYVRK
LETHRVDALV DNITGLANRN EYASVAVLAG STPRKRGGYE THLRRRVEVE LWKAVREASG
ERIRYGDYGV VHPDPQKSSK GGRIPNPYIY YTVPGATLYI ARKNPERKGN SVPPGSTERY
FLKVADELVH RPEFAGADFS WGDRNLYTCR KRPNPQVGSA SRWIAFATSH HVVHVSRSLD
TP