Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_17090 |
Symbol | |
ID | 8387041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1759850 |
End bp | 1760938 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644975785 |
Product | hypothetical protein |
Protein accession | YP_003133567 |
Protein GI | 257055735 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.385932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGGCTG CGCAAAGAAC ACCACTCCTC GCGGTCAAAA GCAAAGAAGG TGAACTGCAA GCCCTTCTCA ACACCACCGA AGTGAACGAC CGTGTGCAAG TCATGGTCGA ATTACTCGAC AGCGTGGATT CGGGCGGGCT GGTCATCAAG AAGGTCGTTG ACTTCTGTGT CGAATCCGCT TCGCGAGGTC GTCCGGTCTG GGTCGACACG ACGTGGTTGA CCAGGGCCAG TGACTTGGGT GCCTCACCCC GAGCGGTACT CGAGCGTCTC GAACACGAGA TCGAGGAAAG CCTTGGTCTT TTCTCGATCT GCTCAGAACA ACCGTGCTTG ATCCCGGTCG TCCCGCTGAA CACCGATGAC GAGGGACTTC GCGCGATACG GATGTTCCTG GAACATCGAA GGCGTCCCGT CGTCGTCCGT TGTCGGCAGA CCAGCCTGCC GACAACGGAG CTACTGCGGA CACTGGATCG GATCGCGACG GCACTGCGAC TCGGGACCGA CGAGTTGCAC TTGGTCTTCG ACGAAGGGTA TGTGAGGAAA CTCGAGACAC ATCGCGTCGA TGCTCTTGTC GACAACATCA CCGGACTGGC GAACCGGAAC GAATACGCCT CGGTCGCGGT GTTGGCCGGT TCGACGCCAC GGAAACGCGG TGGTTACGAG ACACATCTCC GCCGACGCGT CGAGGTGGAG CTGTGGAAGG CCGTGCGGGA GGCGAGTGGC GAACGCATCC GGTACGGGGA TTACGGAGTC GTTCATCCTG ATCCCCAAAA ATCGAGCAAG GGAGGGAGGA TACCCAACCC TTACATCTAT TACACCGTTC CGGGAGCGAC GCTGTACATC GCCCGCAAGA ACCCAGAGCG CAAAGGGAAC TCGGTACCAC CGGGATCCAC CGAACGGTAC TTCCTCAAAG TCGCCGACGA ACTCGTGCAT CGGCCCGAAT TCGCCGGTGC CGACTTCTCG TGGGGTGACC GAAACCTCTA CACTTGCCGC AAACGACCGA ACCCACAGGT GGGCAGCGCA TCGAGGTGGA TCGCGTTCGC CACCTCGCAC CATGTGGTGC ATGTGTCGAG ATCTCTGGAC ACACCGTGA
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Protein sequence | MSAAQRTPLL AVKSKEGELQ ALLNTTEVND RVQVMVELLD SVDSGGLVIK KVVDFCVESA SRGRPVWVDT TWLTRASDLG ASPRAVLERL EHEIEESLGL FSICSEQPCL IPVVPLNTDD EGLRAIRMFL EHRRRPVVVR CRQTSLPTTE LLRTLDRIAT ALRLGTDELH LVFDEGYVRK LETHRVDALV DNITGLANRN EYASVAVLAG STPRKRGGYE THLRRRVEVE LWKAVREASG ERIRYGDYGV VHPDPQKSSK GGRIPNPYIY YTVPGATLYI ARKNPERKGN SVPPGSTERY FLKVADELVH RPEFAGADFS WGDRNLYTCR KRPNPQVGSA SRWIAFATSH HVVHVSRSLD TP
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