Gene Svir_16990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16990 
Symbol 
ID8387031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1750136 
End bp1750867 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content71% 
IMG OID644975775 
ProductPGAP1-like protein 
Protein accessionYP_003133558 
Protein GI257055726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.515319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGGTC CCACCGCGCG GATGATCGCG CAACTGCTCC GGCACCCCGT CTGGCGTTCC 
GGAGATGCCG GTGACGGAAC CGGGCAGGGC GTGCTGTTGG TTCCGGGGTT CGGCTTCGGT
GACTGGAGCC TGCGCCTACT GCGTTCCTGG CTCGCGGCCC GGGGATATCA CCCTCGTGGC
ACGCGGACCG GGCTGAACCT CGGCTGCACG ACCCGGTTGG TCAACCACCT CGAACATCGG
CTGGAGGACC TCGCGCGGAC GACCGGCCGT CGCGTGATCG TCATCGGGCA GAGCCGAGGT
GGGTGGCTCA GCAGGCTCGC CGCCGTCCGC AGGCCCGATC TGGTGCGCGG TTTGGTGATG
CTGGCCTCCC CCGTGCTCAA CCCGCTCGGC GTGCACGCCC GGGGCCTGGA GCTCGCCCAG
GCCCTGGTGA GGCTTTCCGC GTTCGGGGTG CCTGGACTCC TCGACGCCGA CTGCCTCCGG
GGCGCCTGTT ACCGGGTGAA TTCGGCTCTG TTGCGCGCGC CTTTGCCCCG GCAGGTGCCC
GCGGTGTCGG TGTTCTCCCG GAACGACTCC GTGGTGCCGT GGTGGCTGTG CCAGGACCCT
TGTGCGGACT GCGTCGAGGT CACCAGCTCC CACACCGGGA TGGGACTCGA TCCCGACGTC
TACGCCCTGC TCGGACCGTG GTTGGCGCGG TGGAGCGCCG ATCCGAGGCC GACCCTGTTC
GCGGTGCGGT GA
 
Protein sequence
MLGPTARMIA QLLRHPVWRS GDAGDGTGQG VLLVPGFGFG DWSLRLLRSW LAARGYHPRG 
TRTGLNLGCT TRLVNHLEHR LEDLARTTGR RVIVIGQSRG GWLSRLAAVR RPDLVRGLVM
LASPVLNPLG VHARGLELAQ ALVRLSAFGV PGLLDADCLR GACYRVNSAL LRAPLPRQVP
AVSVFSRNDS VVPWWLCQDP CADCVEVTSS HTGMGLDPDV YALLGPWLAR WSADPRPTLF
AVR