Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_16990 |
Symbol | |
ID | 8387031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1750136 |
End bp | 1750867 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644975775 |
Product | PGAP1-like protein |
Protein accession | YP_003133558 |
Protein GI | 257055726 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.515319 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGGTC CCACCGCGCG GATGATCGCG CAACTGCTCC GGCACCCCGT CTGGCGTTCC GGAGATGCCG GTGACGGAAC CGGGCAGGGC GTGCTGTTGG TTCCGGGGTT CGGCTTCGGT GACTGGAGCC TGCGCCTACT GCGTTCCTGG CTCGCGGCCC GGGGATATCA CCCTCGTGGC ACGCGGACCG GGCTGAACCT CGGCTGCACG ACCCGGTTGG TCAACCACCT CGAACATCGG CTGGAGGACC TCGCGCGGAC GACCGGCCGT CGCGTGATCG TCATCGGGCA GAGCCGAGGT GGGTGGCTCA GCAGGCTCGC CGCCGTCCGC AGGCCCGATC TGGTGCGCGG TTTGGTGATG CTGGCCTCCC CCGTGCTCAA CCCGCTCGGC GTGCACGCCC GGGGCCTGGA GCTCGCCCAG GCCCTGGTGA GGCTTTCCGC GTTCGGGGTG CCTGGACTCC TCGACGCCGA CTGCCTCCGG GGCGCCTGTT ACCGGGTGAA TTCGGCTCTG TTGCGCGCGC CTTTGCCCCG GCAGGTGCCC GCGGTGTCGG TGTTCTCCCG GAACGACTCC GTGGTGCCGT GGTGGCTGTG CCAGGACCCT TGTGCGGACT GCGTCGAGGT CACCAGCTCC CACACCGGGA TGGGACTCGA TCCCGACGTC TACGCCCTGC TCGGACCGTG GTTGGCGCGG TGGAGCGCCG ATCCGAGGCC GACCCTGTTC GCGGTGCGGT GA
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Protein sequence | MLGPTARMIA QLLRHPVWRS GDAGDGTGQG VLLVPGFGFG DWSLRLLRSW LAARGYHPRG TRTGLNLGCT TRLVNHLEHR LEDLARTTGR RVIVIGQSRG GWLSRLAAVR RPDLVRGLVM LASPVLNPLG VHARGLELAQ ALVRLSAFGV PGLLDADCLR GACYRVNSAL LRAPLPRQVP AVSVFSRNDS VVPWWLCQDP CADCVEVTSS HTGMGLDPDV YALLGPWLAR WSADPRPTLF AVR
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