Gene Svir_15770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_15770 
Symbol 
ID8386910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1619766 
End bp1620545 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content68% 
IMG OID644975655 
ProductExodeoxyribonuclease III 
Protein accessionYP_003133439 
Protein GI257055607 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.587593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG CGACGTGGAA CGTCAACTCG ATCACTGCCC GGCTACCACG CGTGCTCGCC 
TGGTTGCGCT CCACACAGCC CGACGTGCTG TGTCTCCAAG AGCTCAAATG CAGTGACGAC
GGTTTCCCGC GCGACGACAT CACCGAACTC GGCTACGACG TCGCCTCCTA CGGCGCGAAC
CGGTGGAACG GCGTGGCCAT CCTGTCCCGG GTCGGACTCG AGGACGTCAC CCGAGGACTC
GTCGACGAAC CCACCTACGA GGACGCCCTC CACCCCCGGG CCGTCGCCGC GACCTGCGGC
GGCGTCCGTG TGTGGTCGGT GTACGTACCC AATGGGCGGG AACCCGATCA CCCGCACTAC
ACCTACAAAC TGCGCTGGTT GGAGGCCCTT CACACCACCG TCCTCGCCGA GAACAGCGAC
GACCGGCCGT TCGCCGTGCT CGGCGACTTC AACATCGCGC CCACCGACGA CGACGTGTGG
GACATCTCGC TGTTCGCCGA CTCCACGCAC GTGACCGAAC CCGAGCGCAA GGCACTCGCC
CGGCTCCGCG ACGCCGGCCT CACGGACGTC GTCCCCCGGG CACTGAAGTA CGACCGCCCC
TACACCTACT GGGACTACCG CCAACTCGCG TTCCCGAAGA ACCGCGGCAT GCGCATCGAC
CTCGTCTACG CCAACCGTCC GTTCGCCGAC GCCGTCACCG ACGCCTACGT CGACCGCGAG
GAGCGCAAGG GCAAGGGGGC CTCCGACCAC GCCCCCGTGG TCGTGGACCT CACGCTGTGA
 
Protein sequence
MRIATWNVNS ITARLPRVLA WLRSTQPDVL CLQELKCSDD GFPRDDITEL GYDVASYGAN 
RWNGVAILSR VGLEDVTRGL VDEPTYEDAL HPRAVAATCG GVRVWSVYVP NGREPDHPHY
TYKLRWLEAL HTTVLAENSD DRPFAVLGDF NIAPTDDDVW DISLFADSTH VTEPERKALA
RLRDAGLTDV VPRALKYDRP YTYWDYRQLA FPKNRGMRID LVYANRPFAD AVTDAYVDRE
ERKGKGASDH APVVVDLTL