| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_14640 |
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| Symbol | |
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| ID | 8386797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1511925 |
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| End bp | 1512812 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644975543 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003133331 |
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| Protein GI | 257055499 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.282471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.813553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGCCC AAGCCGCGTC CTCCGGATTG TTGATCGTCG ACAAACCCGG CGGGATGACC
TCGCACGACG TGGTCGCCAA GGTCCGCCGT TTCCTGCGTA CCCGCAAGGT CGGGCACGCG
GGGACGCTCG ATCCGATGGC CACGGGGGTG CTCGTGCTGG GCGTGGGGCG TGCCACGAAA
CTGCTCGGAC ACCTGGCGTT GGATCGCAAG GCCTATCTCG CCACGATCGT CCTCGGCGCC
GCCACCACCA CCGACGACGC CGAGGGGGAG GTCACGTCGA GCGCCGACGC CTCCGGCGTG
CGTGATTCCG ACATCGCCGC CGAGATCGCG GCGTTGACGG GTGACATCCT GCAGAAGCCG
AGCGCGGTGA GCGCGGTGAA GGTGGACGGC AAACGCGCCT ACGCCCGCGT GCGGGCGGGG
GAGGAGGTCG ATCTCCCGGC CCGGCCCGTC ACAGTGCATC GGTTCGACGT GCTCGCCACC
CGACGGGAAG GGCAGCGGGT GGAGCTCGAC GTGATGGTCG ACTGTTCGTC GGGCACGTAC
GTGCGGGCGC TCGCACGTGA TCTGGGTTCG GCGCTCGGGG TCGGTGGTCA TCTCGCCGCG
CTGCGGCGCA CCTCGGTCGG ACCGTTCACC CTGGCGCAGG CCCGCACCCT CGACGAGGTC
GAGCGCGCGC CGGGGCTGTC GTTGAGTCTG AGCGAGGCCG TGGCGGCCGC GTTCCCCCGG
GTCGACGTCG CCGCCTCCGC CGCGCACGCG ATCCGGCACG GGCAGCGCAT CCCCGCGGCC
GGGATCGACG GCACCTACGG AGTGTTCGGC CCCGACGGTC GTGTGCTCGC GCTGGCGCGG
GACAGTGGTC GGGTGGCCAA GTCCGTGGTC GTCCTCGACC CCGCCTGA
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| Protein sequence | MSAQAASSGL LIVDKPGGMT SHDVVAKVRR FLRTRKVGHA GTLDPMATGV LVLGVGRATK
LLGHLALDRK AYLATIVLGA ATTTDDAEGE VTSSADASGV RDSDIAAEIA ALTGDILQKP
SAVSAVKVDG KRAYARVRAG EEVDLPARPV TVHRFDVLAT RREGQRVELD VMVDCSSGTY
VRALARDLGS ALGVGGHLAA LRRTSVGPFT LAQARTLDEV ERAPGLSLSL SEAVAAAFPR
VDVAASAAHA IRHGQRIPAA GIDGTYGVFG PDGRVLALAR DSGRVAKSVV VLDPA
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