| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10730 |
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| Symbol | |
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| ID | 8386410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1104644 |
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| End bp | 1106056 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644975163 |
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| Product | predicted RNA-binding protein containing a PIN domain protein |
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| Protein accession | YP_003132956 |
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| Protein GI | 257055124 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3688] Predicted RNA-binding protein containing a PIN domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCGT CGTCCGCGTA CCCCGAGCAT CCCGAGGAGG CCGTCCCGGG AGAGCCCGTT
GTCGGTACGC CCGGCGAAGC TGAGCCCGCC ACCCGACCGA GTAAGACAGG GGAGGGCGTG
TCCGATACGG AATCCGTCGA CTGGCTTGGT CTTCCCGAGC CCGTCCGGGA ACGAGTGGCC
ACGCTTGCCG CCGCGGCGCT GGGCAAACTC CCCAGTGACG ACGTGCCGCG CCAGCTGCGG
CCCGTGGCGC GCTTCGCGCC GGCCAAGCGC GCGAAGCTCG GCGGTACCGC GCTGTTGACG
GCGTTGCGGG ACTCCCCACG ATTCCGCACC GCGGTGCTCG AGTGGCTGCG TGAACACCGT
GTGGACGCCC TGAATCCGAA CGACGACGAT TCCGTCGCCG CCGCCGCGGC AGCGGTGTTG
CTCGGTGAGT CGAGTGCCTC GTCGCGAGTA CGACTGGTGG CGAAGAACAC CGAGGAATCA
GCTCTGCGAG CCGAACGCGA CGCGGCCGTG GCCCGGGTGC GGAAGTTGGA GGCCGAGGTC
GGCAGGCTCC GCGCGGAACT GGAAGAGGCC CGTGTGGAGG TCGAGCGGGC GAGGAACGAA
CGCGAGGAGG AGCTGGCCCG ACTGCGTGGC AGGCTGCGGA AGCAGGGTGT CGTGGTGCGC
CAGGCGGAGG ACACGGCCGC GGAGGCCGTG GCGGCGCGAC AGCGGATCGA GGCCGAGCGG
GACGCCGAGA TCGAGGCCAT GGCCGCGCGG TTGGAACGGG AACGACAGAA GGCCCTGGCG
GAGCGGGCCA GAGCGGAACG GGCCAAGGCC GAGGCCGAGG CGGCGCGACA GGCCGCCCGG
GAGGCGCGCG ATGCCGACGA GGTGCGACTG TCGATGTTGC TGGACACGCT CAGTGGAGCG
GTGGACGGTC TGCGTCGGGA GTTGTCGATC GGAACGGGTT CCCGCAGACC CGCCGACACC
GTCAGAGGGG CGAATCCGGG GCGTCACGGT GGTCGCGTCT CCGAACCGGC CGGGCTCGAC
AGTCTGCTCG CGCTGCCGAA CGTGCATCTG ATCGTGGACG GCTACAACGT CACCAAGACC
GGTTATCCGG AACTGTCCCT CGTCGAACAG CGTCAGCGTT TGGTGAGGGA GCTCGGTGCC
TTGGCCTCGC GTACGGGTGC CGAGATCACC GTCGTGTTCG ACGGCGCCGA CGTGACCTCC
ATCCCGGCCG CGGGGGCGCG GAACGTGCGG GTCCTGTTCT CCGACCCCGG TGTCCTGGCC
GACGACGTCA TCCGCTCCCT TGTGCTGGCG GAGCCGCAGG GGCGTCCCCT CGTGGTCGCC
ACCTCCGATC AGGCTGTGGT GAACTCGGTG TGCGCGGCGG GTTCCTACGC CATCCCCGCC
GCTGTTCTGC TCGCCCGCCT CGGTCGGGTG TAG
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| Protein sequence | MLSSSAYPEH PEEAVPGEPV VGTPGEAEPA TRPSKTGEGV SDTESVDWLG LPEPVRERVA
TLAAAALGKL PSDDVPRQLR PVARFAPAKR AKLGGTALLT ALRDSPRFRT AVLEWLREHR
VDALNPNDDD SVAAAAAAVL LGESSASSRV RLVAKNTEES ALRAERDAAV ARVRKLEAEV
GRLRAELEEA RVEVERARNE REEELARLRG RLRKQGVVVR QAEDTAAEAV AARQRIEAER
DAEIEAMAAR LERERQKALA ERARAERAKA EAEAARQAAR EARDADEVRL SMLLDTLSGA
VDGLRRELSI GTGSRRPADT VRGANPGRHG GRVSEPAGLD SLLALPNVHL IVDGYNVTKT
GYPELSLVEQ RQRLVRELGA LASRTGAEIT VVFDGADVTS IPAAGARNVR VLFSDPGVLA
DDVIRSLVLA EPQGRPLVVA TSDQAVVNSV CAAGSYAIPA AVLLARLGRV
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