| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10410 |
|---|
| Symbol | |
|---|
| ID | 8386378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1072068 |
|---|
| End bp | 1072712 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644975131 |
|---|
| Product | uncharacterized membrane-associated protein |
|---|
| Protein accession | YP_003132924 |
|---|
| Protein GI | 257055092 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0586] Uncharacterized membrane-associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.644792 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0211911 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCAACT GGCTGCAGAG CCTGCCGCAG CCGGCTCTGG TCGGTGCGAC AGGACTGCTG
GTCCTGCTTG AGTGCACCGT GGGACTGGGG TTCATCGCAC CCGGCGAGTC CGGGCTGCTC
ATCGCGGCCA CCACGGCCAC CACGGCACCC CGGTTCGTCG TCCTCGTCCT GGTGGTCACG
GTGTGCGCCG GCATCGGCGA CTCGATCGGG TACGCGATCG GCCGTCGGTT CGGGCCACGC
CTTCGCGAGA CGAAGCTGAT TCAACGGTAC GGCACCGATG CCTGGGACAA GGCCACGGGC
ATCCTCCAGC GCCGAGGGGC GTGGGCGGTG TTCTTCGCCC GGTTCCTGCC GGTGGTACGG
ACGTTGACCC CGGCGGCGGC GGGCACGTCC AAACTGCCGT ATCGAAAATT CCTGCCCGCG
GTGGTCTCCG GGGCCCTGTG CTGGTCGCTC CTGCACGTCG GTCTCGGCGC GGCGTTGGGA
GAGGCCGCGC GCAGGGTGGA GAACGTCCTC AGCACCGGCG GCATGATCGT CGTCGGTGTG
CTCGCAGCGA TCGGCCTGTT CTTCCTCATC CGTTTCAAGA AGAAGAAAGC CGCCGCCGCA
CTCGCCGCTG CCGCCGAGAA GGAACCGGCC GACGACCGCG GCTGA
|
|---|
| Protein sequence | MLNWLQSLPQ PALVGATGLL VLLECTVGLG FIAPGESGLL IAATTATTAP RFVVLVLVVT
VCAGIGDSIG YAIGRRFGPR LRETKLIQRY GTDAWDKATG ILQRRGAWAV FFARFLPVVR
TLTPAAAGTS KLPYRKFLPA VVSGALCWSL LHVGLGAALG EAARRVENVL STGGMIVVGV
LAAIGLFFLI RFKKKKAAAA LAAAAEKEPA DDRG
|
|---|
| |