Gene Svir_10110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_10110 
Symbol 
ID8386348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1038605 
End bp1039792 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content72% 
IMG OID644975101 
Product8-amino-7-oxononanoate synthase 
Protein accessionYP_003132895 
Protein GI257055063 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCAC CCGGTTCCGC TCGCACGGTA ACCCCGCCCG AGCATGTCTT CGACTGGCTC 
GACGGCATCG CCGAACAGCG CGCCGACGCG GGGCTGACCC GCGTTCTGCG CGCTCGCTCG
GCGGAGGAGG GACAGCTCGA CCTCGCTGGG AACGACTACC TCGGCCTGGC CCGTGACAAA
CGAGTCGCCG GTGCGGCGGC CGCCGCGGCG TTACGCTGGG GCGCCGGAGC CACCGGATCA
CGGCTGGTCA CCGGGTCGAC CGAACTGCAC GCGGAGCTGG AGTACGAACT GGCCCGCTTC
TGCGGGGCCC AGGCGGCGCT GGTGTTCTCG TCCGGCTTCA CCGCCAACCT CGGTGCCGTG
ACGGCGCTGA CCGGGCGGGA GGCGGCCATC GTCACCGACA AGTACATCCA CGCCTCTCTC
ATCGAGGGCT GCCGGTTGTC CCGTGCCGAC GTCGCCGCCG TGGCCCACAA CAGTCCCGAG
GCGGTGGAGC ACGCCTTGGC GACACGACGC AAGCAGCGCG CGCTCGTCGT CACCGACTCG
GTGTTCTCCG TGGACGGCGA CCTCGCGCCG CTGCGTGAGC TGTCGGCCGT CTGCCGCAGG
CATTCCGCCG CGTTGCTGGT GGACGACGCC CACGGTCTGG GTGTCCTCGG CGACGGCGGC
CGCGGCGCCG TACACGCCGC CGGCCTGGCG GGCGAGCCGG ACGTGGTCAT CACCGTGACG
TTGTCGAAGT CCCTCGGCGC CCAGGGAGGT GCCGTCCTCG GCCCGCGTCG TGTCATCAAG
CACCTGGTGA ACACGGCACG GAGCTTCATC TTCGACACGG CACTGGCCCC CGCCAGCGCG
GCCTCCGCCC TCGCCGCACT CCGGGTGTTG CAGGACGAAC CGGAACTGGC CGAACGGGTA
CGCACGCGGG CGAACGAACT GTCGACCCGG TTGCACGAAG CCGGGTTCGC GGTGACCGTT
CCGGACGGTG CGGTGGTGTC GGTACGCGCA CCCGGTCCGG ACGACGCCGT CGCGTGGGCC
GCCCGGTGCG CCGAGCGAGG CGTACGTGTC GGCTGCTTCC GTCCGCCGTC GGTCCCCGAC
GGTGTCTCAC GGCTGCGACT GACCGCCAGG GCGGACCTCA CCGACTCCGA AATGGACCGG
GCCGTGACGG TCATCACGGA GACCGCGCCA CCGCAGGCCC GGCGCTGA
 
Protein sequence
MNAPGSARTV TPPEHVFDWL DGIAEQRADA GLTRVLRARS AEEGQLDLAG NDYLGLARDK 
RVAGAAAAAA LRWGAGATGS RLVTGSTELH AELEYELARF CGAQAALVFS SGFTANLGAV
TALTGREAAI VTDKYIHASL IEGCRLSRAD VAAVAHNSPE AVEHALATRR KQRALVVTDS
VFSVDGDLAP LRELSAVCRR HSAALLVDDA HGLGVLGDGG RGAVHAAGLA GEPDVVITVT
LSKSLGAQGG AVLGPRRVIK HLVNTARSFI FDTALAPASA ASALAALRVL QDEPELAERV
RTRANELSTR LHEAGFAVTV PDGAVVSVRA PGPDDAVAWA ARCAERGVRV GCFRPPSVPD
GVSRLRLTAR ADLTDSEMDR AVTVITETAP PQARR