| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_08230 |
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| Symbol | |
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| ID | 8386160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 840852 |
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| End bp | 843335 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974914 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_003132710 |
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| Protein GI | 257054878 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGGC GCAAGAAACC CATCACCCGC GTCGACCCGG CCGCCTTCGA TCAGGCGGGC
GCGCGTGTTT TCGACAACCC GGTGACCACC GAGATCGAGG AGTCGTACCT GGAGTACGCC
TACTCGGTGA TCCATTCCCG TGCGCTGCCG GACGCGCGCG ACGGACTCAA GCCCGTACAT
CGCCGCATCC TGTACTCGAT GTACGAAAGC GGCTATCGCC CCAACCACGC CTACGTGAAG
TCGTCGCGTG TGGTCGGTGA CGTGATGGGC CGCTACCACC CGCACGGCGA CACCGCCATC
TACGACGCGA TGGTGCGGTT GGCGCAGGAC TTCTCCATGA ACGTCCCGTT GGTGGACGGG
CACGGCAACT TCGGAAGCCC GGACGACGGG CCCGCGGCCT CGCGGTACAC CGAGGCCCGG
ATGTCCTCCG AGGCCATGCT GCTGGTGGAC GAGCTGGGCG AGGACACCGT CGACTTCCGC
CCGAACTACG ACGGGTCGCT CCAGGAGCCG TCGGTGCTGC CCGCGGCGTT CCCCAACCTG
TTGGTCAACG GCACCTCGGG CATCGCGGTC GGCATGGCGA CCAACATGAT CCCGCACAAC
CTCGGTGAGA TCGTGGCCGC GGCGCGGTGG CTCATCAACC ATCCGAACGC CTCGCTGGAC
AAGTTGATGG AGTTCGTGCC CGGCCCCGAC CTGCCCACGG GCGGTCAGCT GCTGGGGCTG
GATCAGGTGC GCAAGGCGTA CGAGACCGGG CGCGGGGTCG TCCGCATGCG CGCGAAGGCG
ACGACCGGTC CCATCGAGGG CAGCCGTAGG CAGGGCATCA CGGTCACCGA ACTGCCCTAC
GGTGTGGGCC CGGAGAAGGT GATCGAACGC ATCACCGAGG AGGTCAACAA GACCAAGCGG
TTGACCGGCA TCGCCGACGT CAAGGACCTC ACCGACCGGG AGAACGGCAC GAAACTCGTC
ATCGAGTGCA AGGTCGGGGT CAACCCACAG GCCCTGTTGG CCGACCTCTA CCGACTCACC
CCGCTGGAGC AGTCGTTCGG CATCAACAAC CTCGTCCTCG TCGACGGCCA GCCGCGCACG
TTGGGGCTCA AGGAACTGCT GGAGGTGTTC CTGGCCCACC GCTACGAGGT CGTCACCCGG
CGTACGCGCT ACCGCCGTCG TAAGCGCGAG GAACGGCTGC ACCTGGTGGA GGGCCTGCTC
AAGGCCCTGG TCGACATCGA CAAGGTCATC AAGCTCATCC GGGGCAGCGA GAACGCGCAG
GCCGCCAAGG AGGGCCTGAT GAAGCGGTTC AAGCTGTCCG AGGTCCAGGC CGCGTACATC
CTCGACACGC CGCTGCGCAG GCTCACCAAG TACGACAAGC TCGAATTGGA GTCCGAACAG
GACAGGCTCC GGAAGGAGAT CGCGGAGCTG ACGGAGATCC TCGACGACGA GAAGGTGCTC
AAGCGGGTCG TGTCGAAGGA ATTGGCCAAG GTGGCCAAGG ACTTCGCCGT CCCGCGTCGC
ACGGCGTTGA TCGACGGTGA CCTGAAGGAG GTGTTGGCCG CCTCCAAGCC GGCGGGCCCG
TTGGAGGTCG CCGACGATCC GTGCCAGGTG ATCCTGTCGT CCACCGGGTT GGTGGCCCGG
ACCGCGGCAG AGTCCGAGGA GGCGGTCGAG GGCCGCAGGC GCAGTGGCCG GGCCCGACAC
GACGCCATCG CCGCCATGGT GCACACCACC GCGCGAGGCC AGGTGTTGTT GGTGACCAAC
CGGGGCCGCG CGTTCAAGAC CGACGTGTTG CCGTTGCCGG TGCTGCCGGA GTCGTCGGGC
ACGGTGTCGT TGCGGGACGG CGTGGACGTG CGGGAACTCG CCCCGTTGGA GCGTGACGAA
CGGGTGGTGG GACTGGCCCC GTTGGGTGAG CAGGCGCAAG GCTCGCCGGG GTTGGCGTTG
GGTACCCGGC ACGGTGTGGT GAAGGTGTGC GCGCCCGACT GGCCGGTGCG GTCCGACGAG
TTCGACGTCA TCACGCTCAA GGACGGTGAC GAGGTGGTGG GTGCCACGTG GCTCACCGAC
GGTGCGGAGA CGCTGACGTT CGTGACGTCC CAGGCGTCGC TGTTGCGTTT CGACGCCTCG
CTGGTGCGGC CTCAGGGACT GCGCGGGGGC GGGGTCGCGG GGATCAACCT GCCCAAGGAC
TCCGAAGTGG TGTTCTTCGG GGCGGTGCGC ACCGACGATG CCGAACACGG TGAGCCGATG
GTGGTGACGG CGACCGGGGA GACCGTGAAG GTCACCCCGC TGTCCCAGTA CCCGGCCAAG
GGCCGTGCGA CCGGTGGGGT GCGGGCGCAT CGGTTCCTCA AGGGTGAGAC GAGGCTCGTG
CTGGCCTGGG TCGGTCCGCG TCCCGTCGGG TCGACGAAGC GGGGAGAGTC GGTCGAGTTG
CCCGAGGTCG ATCCGCGCCG TGACGGTTCG GGAGCCGCCC ACCCCGGCCC CGACGTCGTG
GGTCACCAGA TCGAACGCCC GTGA
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| Protein sequence | MARRKKPITR VDPAAFDQAG ARVFDNPVTT EIEESYLEYA YSVIHSRALP DARDGLKPVH
RRILYSMYES GYRPNHAYVK SSRVVGDVMG RYHPHGDTAI YDAMVRLAQD FSMNVPLVDG
HGNFGSPDDG PAASRYTEAR MSSEAMLLVD ELGEDTVDFR PNYDGSLQEP SVLPAAFPNL
LVNGTSGIAV GMATNMIPHN LGEIVAAARW LINHPNASLD KLMEFVPGPD LPTGGQLLGL
DQVRKAYETG RGVVRMRAKA TTGPIEGSRR QGITVTELPY GVGPEKVIER ITEEVNKTKR
LTGIADVKDL TDRENGTKLV IECKVGVNPQ ALLADLYRLT PLEQSFGINN LVLVDGQPRT
LGLKELLEVF LAHRYEVVTR RTRYRRRKRE ERLHLVEGLL KALVDIDKVI KLIRGSENAQ
AAKEGLMKRF KLSEVQAAYI LDTPLRRLTK YDKLELESEQ DRLRKEIAEL TEILDDEKVL
KRVVSKELAK VAKDFAVPRR TALIDGDLKE VLAASKPAGP LEVADDPCQV ILSSTGLVAR
TAAESEEAVE GRRRSGRARH DAIAAMVHTT ARGQVLLVTN RGRAFKTDVL PLPVLPESSG
TVSLRDGVDV RELAPLERDE RVVGLAPLGE QAQGSPGLAL GTRHGVVKVC APDWPVRSDE
FDVITLKDGD EVVGATWLTD GAETLTFVTS QASLLRFDAS LVRPQGLRGG GVAGINLPKD
SEVVFFGAVR TDDAEHGEPM VVTATGETVK VTPLSQYPAK GRATGGVRAH RFLKGETRLV
LAWVGPRPVG STKRGESVEL PEVDPRRDGS GAAHPGPDVV GHQIERP
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