| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_07050 |
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| Symbol | |
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| ID | 8386043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 718994 |
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| End bp | 720283 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644974802 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003132603 |
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| Protein GI | 257054771 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.267941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGGC GGGTCCTGAC CGGCAGCATG GCCGGCGCCG TTTTGGAGTG GTACGACTTC
GCCATCTACG GCGTACTGGC GGCCATGGTC CTCGGGCCGC TGTTCTTCCC CAGCGACAGC
GGTATCGCCA GTCTGCTGAT GGCTCTGGCG ACTCAGGGGC TCGGCTTCTT CGCCCGTCCC
CTCGGCGGAA TCGTCTTCGG TCACCTCGGT GACCGGTTCG GCCGCAAACC CATGCTGGTC
GTGACGTTCC TGCTGCTCGG CACGGCGACG GCGGCCATCG GCCTGTTGCC GACGTACGCC
GACATCGGTA TCACGGCGAC CTTCCTGCTC GTCGGTCTTC GCCTGATCCA AGGTTTCGCC
CTGGGCGGTG AGTTCGGCGC GGCCGTGTTG TTGGTGAGCG AGTACGGCGA ACCTAAACGT
CGCGGATTCT GGGCCTCGTG GCCACAGGCG GGCGCTCCCG CCGGGACCGT GCTGGCCACC
GCGGTCATCA CCGTGCTGAC CCTGACGATG AGCGAGGCCA CCTTCGAGTC GTGGGGCTGG
CGTATCGCGT TCCTGATCGC CATCCCGTTG TTGGCCATCG GCTTCTGGGT CCGGCGCGGT
GTCGAGGAAT CGCCCGTGTT CCGCCAGGCA CAGGCCCAGG CGGCGAAGAC GAGCAAGAGC
ACCTCCACCG AGAAGCAGAA GTCCAGCATC GTGCTCGCGT TGCGGCGCCC CCGCCAGGTG
CTGCACGGAC TCGGGCAGCG GTTGGGCGAG AACATCGCGT TCTACATCTA CACGACGTTC
GTCATCGCCT ACGCCACCAC GTATTTCGAG TTCGACCGTG GTGACGTGAT GCTCGCGGTG
ACCTTCGGGT CGGTGTTCCA GTTCCTCGGC ATGATCAGCG GCGGTGCGTG GTCCGACCGG
GTCGGCCGGA AGGTCGCGAT GCTGATTCCG ACCGGGGTGC TGATCGTCTG GGCACCGGTG
TTCTTCTGGC TGGTGCAGTT CGAGAGCGTG CCGTTGCTGT GGGTCGGTGT CTGCGTGGGC
ACGTTCTTCC ACGGCATGCT GGCCGGTCCC GAGGCCGCGT GGATCACCGA GCTGTTCCCG
ACCCGGTACC GCTACGCGGG CTCGTCGCTG GTGTACCAGG GTTCGTCGAT CATCGCCGGT
GCCCCGGCTC CGTTCATCGC CATCTGGCTG GTCGACACCT TCGGTGTCGG CATGGTCATC
GGCTATCTGG TCATCACCAT GGCGATCACG TTCATCGCGG TGGCCACGAG TAGGGAGACC
AAAGGCGTCG ACCTCGAGAA GATCGTCTGA
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| Protein sequence | MFRRVLTGSM AGAVLEWYDF AIYGVLAAMV LGPLFFPSDS GIASLLMALA TQGLGFFARP
LGGIVFGHLG DRFGRKPMLV VTFLLLGTAT AAIGLLPTYA DIGITATFLL VGLRLIQGFA
LGGEFGAAVL LVSEYGEPKR RGFWASWPQA GAPAGTVLAT AVITVLTLTM SEATFESWGW
RIAFLIAIPL LAIGFWVRRG VEESPVFRQA QAQAAKTSKS TSTEKQKSSI VLALRRPRQV
LHGLGQRLGE NIAFYIYTTF VIAYATTYFE FDRGDVMLAV TFGSVFQFLG MISGGAWSDR
VGRKVAMLIP TGVLIVWAPV FFWLVQFESV PLLWVGVCVG TFFHGMLAGP EAAWITELFP
TRYRYAGSSL VYQGSSIIAG APAPFIAIWL VDTFGVGMVI GYLVITMAIT FIAVATSRET
KGVDLEKIV
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