| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06690 |
|---|
| Symbol | |
|---|
| ID | 8386007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 679923 |
|---|
| End bp | 680693 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644974766 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003132567 |
|---|
| Protein GI | 257054735 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAACA TGCCCGAGCG TGTCAACAGC CTCAGCAGGT CGGCGCGGTT TTCCGACGAA
AAACCCACCG GGGACGCCCG ACGCGACCGC TGGCGCAAAC ACCGGATCGC ACGGCGAGCC
GAGTTCGTGG AGGCCGCGCT GAAAGCGCTC GACGAACACG GACCCGACAT GGGCATGGAG
GAACTGGCCG CCGCCGCGGG CGTGACCAAA CCGGTGCTGT ACCGGCACTT CGCCGACAAG
GCCGACCTGT ACCTCGCGCT CGGTCAACGG GGCACGGAGA TCCTTTTCGA ACGGCTCATG
CCGGCCATCA ACTCCGAACT CGCCCCACTG CCCCGGATCC GCATGGCGCT CACCGCGTTC
TTCTCGGTGA TCGAGGAGCA TCCGAATCTG TACCGACTGC TGGTGCGCAG GTCGTTCGGC
GGCAAACCCG TGGGCACCGA CGTGGTCGCC GAGGACAAGC AACTCATCGC CGCGGCACTG
ACCGCGCTGC TCGGCGACTA CATGCGGATG CTCAACATGG ACTCCGGCGC GGCCGAGCCC
TGGGCCCACG GACTCGTCGG CATGGTGCAG AGCACCGGTG AATGGTGGCT GGACAAGCGG
ACCATGAGCC GTGACAGCGT CGTGGAGTAC CTGACCCAGA TCATCTGGGC CGCCATCGAC
GGACTGACCC GCCAGCACGG AATCGTGTTG GACCCGAACA AACCGCTGGA AGCCAACAAG
GTCGTCACCT TGAAACCCGG CCCCTTCGAA CAGACGGGAG AGACATCGTG A
|
|---|
| Protein sequence | MDNMPERVNS LSRSARFSDE KPTGDARRDR WRKHRIARRA EFVEAALKAL DEHGPDMGME
ELAAAAGVTK PVLYRHFADK ADLYLALGQR GTEILFERLM PAINSELAPL PRIRMALTAF
FSVIEEHPNL YRLLVRRSFG GKPVGTDVVA EDKQLIAAAL TALLGDYMRM LNMDSGAAEP
WAHGLVGMVQ STGEWWLDKR TMSRDSVVEY LTQIIWAAID GLTRQHGIVL DPNKPLEANK
VVTLKPGPFE QTGETS
|
|---|
| |