| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4441 |
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| Symbol | |
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| ID | 5060930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5035451 |
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| End bp | 5036389 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640476707 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_001161247 |
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| Protein GI | 145596950 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.902716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATACAG ATCTCACCGC CGCCTACGAC CGATGCCGTG AGCTACACCG ACACCACGGC
CGTACCTACT ATCTCGCCAC CCGACTACTT CCCGCCTGGA AACGGCGACA TGTACATGCT
TTGTACGGTT TCACCCGCTA TGCGGACGAG ATCGTTGACC GAACCGAGGA CCTGCCCTCG
GCACATCGGG CCGCCCAGCT GGACGACTGG GCTGGGCGAT TCATCGCCGG CCTGCACGGT
GAGCCGGTCA CCGACCCGCT GCTCCCGGCC GTGCTGCACA CCATCGCCGT CTTCGACCTG
GACCGAGACG ACTTCGCGTC GTTTCTCAAG AGCATGGCGA TGGACCTGAC CATCAGCTCC
TACCCCACCT ATGCCGACCT GCTCCACTAC ATGGAGGGCT CCGCCGCCGT CATCGGCACG
ATGATGCTGC CGATCCTCGG CAGCGCCAAC CCGGCCGCGG CCCGCGAGCC CGCCCGCCAG
CTCGGCTTCG CCTTTCAACT GACGAACTTC ATCCGGGACG TCGCCGAGGA CCTCGACCGC
GGCCGAACGT ACCTGCCGGA CGAGGACCTG ACCCGCTTCG GTGTCACCCG CGACGACCTA
CTGGCAGCCC GTGCCGCCGG CCGGACCAGC GAACCGATTC GGGAACTGAT CCGGTACGAG
GTGGCCCGGG CCCAGGCGCA CTACGCTGCC GCCGCACCCG GGGTGACCCT GCTCGCCCCC
GCCTCGCAGG CCTGCATCCG CACCGCGTAC ACGCTCTACG GGGGAATCCT CGACGAGGTC
GCCGAGCAGG ACTTCGATGT CTTCGCCCGG CGGGCCCGGG TGCCGCAGCA CCACCGGATG
ACGGAGACCG CCCGTGCCCT GCTCACCCGA ACCGGCACCC CCGTCCAGGT GCCCGGCCCA
GCACTGTTGA CACCCACACC CGGCCCTTCC CTAGGCTGA
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| Protein sequence | MDTDLTAAYD RCRELHRHHG RTYYLATRLL PAWKRRHVHA LYGFTRYADE IVDRTEDLPS
AHRAAQLDDW AGRFIAGLHG EPVTDPLLPA VLHTIAVFDL DRDDFASFLK SMAMDLTISS
YPTYADLLHY MEGSAAVIGT MMLPILGSAN PAAAREPARQ LGFAFQLTNF IRDVAEDLDR
GRTYLPDEDL TRFGVTRDDL LAARAAGRTS EPIRELIRYE VARAQAHYAA AAPGVTLLAP
ASQACIRTAY TLYGGILDEV AEQDFDVFAR RARVPQHHRM TETARALLTR TGTPVQVPGP
ALLTPTPGPS LG
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