| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4440 |
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| Symbol | |
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| ID | 5060929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 5034234 |
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| End bp | 5035388 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640476706 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001161246 |
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| Protein GI | 145596949 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACG ACGCAGTTGT GGGTAAAGCC CTCCGGGTCA TCCCGGCCCG CCGCGGGGGC
GAAGCCGACC CGGTTGGCGC TCGCCTGGCC GCATACACCG AGGAGGTCGT CGCTGCGGTT
GACGACACGC TCGTCGACTT CCTCGCCACC GAGATCGACG CGCTGGCCGC GATCGACTCA
AGCGCCGGCG GGTTCGCCAC CACTGCCCGC GACAGCGTGT TGGCCGGGGG GAAGCGACTC
CGCCCGACCT TCGCCTACTG GGGGTGGCGG GGCGTGGTCG GTGGCGCGGA GCCACTGCCC
CCCGTGCTGC CAGCGCTCGC CGCGCTGGAA CTGCTGCACG CCTTCGCGCT CACCCACGAC
GACGTGATGG ATTCCTCCGC CACCCGGCGC GGCCGGCCCA CCGCGCACGT CGCGGTCGCC
GCCCAACACG CCGCGGCCGG CCGCCGCGGC GACTCCGGGA AGTTCGGCGA GAATGTCGCC
GTCCTCGTCG GCGACCTCTG TTTGGTCTGG GCCGACCGGC TCCTCGCGCA GGCTGTCCTA
CCGCCGGCCC GGCTGCTGGA GGTCCGGCAC TGCTACGACC AGATGCGGGT AGAGACGGTC
GCCGGGCAGT ACCTCGACGT CCTCGGCGAG AGCGACCCGA CGAACTGGTC GGTGGAGCGG
GCCCTACAGG TCGCTCGCTA CAAGACCGCC AGCTACACGG TGCGGTGGCC GCTGCTCTTC
GGCGCCCGCC TGGCCGGCGT CGTCGCCGAC TCTCCGCTGA TCGCCGCGTA CGACCGCTAC
GGCCAGGCCA TCGGCGAGGC GTTCCAACTC TGCGACGACC TGCTCGGCGT CTACGGCGAC
CCGGCCACCA CCGGCAAACC GGCCGGTGAC GATCTGCGTA CCGGCAAGCC GACCGTGCTG
CTCATGCTGG CCCGCACCCT GGCCGACCCC ACCCAGCGTC AAGCCCTCGA CCAGGTCGGC
GCGGGCGCGG AGGACTGGGA GGTCAAGCGA CTGGCGGAGG TGGTCGCGGA GACCGGTGCG
GTCGAGCAGG TCGAGCAGAT GATCTCTGAT CGGGTCGACG AGGCGCTCAC CGCCCTCGAT
GTTCCGTCGA TCGATGACAC CGCGCGGACC GCGCTCGCCG GTCTCGCCGC CGTCGCTACC
CATCGGCGAG CATGA
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| Protein sequence | MANDAVVGKA LRVIPARRGG EADPVGARLA AYTEEVVAAV DDTLVDFLAT EIDALAAIDS
SAGGFATTAR DSVLAGGKRL RPTFAYWGWR GVVGGAEPLP PVLPALAALE LLHAFALTHD
DVMDSSATRR GRPTAHVAVA AQHAAAGRRG DSGKFGENVA VLVGDLCLVW ADRLLAQAVL
PPARLLEVRH CYDQMRVETV AGQYLDVLGE SDPTNWSVER ALQVARYKTA SYTVRWPLLF
GARLAGVVAD SPLIAAYDRY GQAIGEAFQL CDDLLGVYGD PATTGKPAGD DLRTGKPTVL
LMLARTLADP TQRQALDQVG AGAEDWEVKR LAEVVAETGA VEQVEQMISD RVDEALTALD
VPSIDDTART ALAGLAAVAT HRRA
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