| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4400 |
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| Symbol | |
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| ID | 5060886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4977223 |
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| End bp | 4978854 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640476663 |
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| Product | ABC transporter related |
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| Protein accession | YP_001161206 |
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| Protein GI | 145596909 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.675825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.828936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACAT TCGACCGGGT GACCGTCCGC TACGCCGAGG ACGGGCCGCC ACCGCTGCGC
GACGTGACGC TGACCGTCGA GGAGGGCGAG CTGTGCCTGG TCGCCGGGCG CACCGGGGCG
GGCAAGTCGA CGCTGCTGCG GGCGATCAAC GGGCTGGTGC CGCACTTCAC CGGCGGTACT
CTGCACGGCT CGGTCACCGT GGACGGCCGG GACACCCGCC GGCACCCGCC CCGCGACCTC
GCCGATGTCG TCGGCGTGGT CGGCCAGGAC CCGCTCTCCG GGTTCGTCAC CGACACCGTC
GAGGAGGAGC TGGCGTACGG CATGGAGCAG CTCTCCCTGC CACCGGCGGT GATGCGCAAG
CGGGTGGAGG AGACGCTGGA CCTGCTCGGC ATCGCCGAGC TACGCAACCG GCCACTTCGG
ACGCTCTCCG GTGGACAGCA GCAACGGGTC GCCATCGGTG CTGTCCTCAC CAGCCACCCC
CGGGTCCTGG TACTCGACGA ACCCACCTCC GCCCTGGACC CGACCGCCGC CGAGGACGTC
CTCGCCGCGG TCACCCGGCT GGTCCACGAC CTCGGGGTCA CCGTGGTGCT GGCCGAGCAC
CGGCTCGAAC GGGTCATGCA GTACGCCGAC CGCCTGCTCT ACCTGCCCGG CGACGGTCGC
GTGGTCGACG GGCCTCCGGC GACGGTGCTG ACCGGGGTGG AGCTTGCCCC GCCCCTGGTC
GAACTGGGCC GCCTGGCCGG CTGGGACCCG CTACCGCTGT CGGTACGCGA TGCGCGTCGA
CGCGCAGCCG AGCTGCGTGG GCGGCTCGCC GAAGGGGCGC CCCCCGCGCC GACTCCCGCA
CCGGAACCGA CGGCGGCACT GAGCGCACGG AAGGTCGTCG TACGGTATCC GGGTACCGTC
GCCGTTGCCG GCGTCGACCT CGACCTTCAG GTTGGCCAGG TCGTCGCCTT GATGGGCCGC
AACGGATCCG GAAAGTCCAG CCTGCTCTGG GCCGTGCAGG GCAGCGGCCC CCGGCAGGGC
GGCACGGTGA CCGTGACCGG TTCGGCGGGG TCCGTCGACC CGAAGAGCCT GCCGGCGCAC
CAGGCCCGCC GGCAGGTCGG GCTGGTTCCA CAGACCCCGG GCGACCTGCT CTACCTGGAG
ACGGTCGACG GCGAGTGCCA CCAGGCCGAC AAGGAGACCG AGGCGGCGGC CGGCACCTGC
CGCGCCCTGC TGGACCAGCT CACCCCCGGC CTGCCCGGTG ACCGGCACCC GCGGGACCTC
TCCGAGGGGC AGCGGCTGGC GCTCGCGCTC GCGGTGCAGC TCACCGCCGC CCCGCCGGTG
GTGCTGCTCG ACGAACCGAC CCGCGGCCTG GACTACCTCG CCAAGCGGCA GTTCGTCTCG
CTGGTGCGGG GGCTGGCCGC CGACGGGCGC AGCGTGGTGG TGGCGACGCA CGATGTCGAG
CTGGTCGCGG CGCTGGCCGA CCGGGTGATC GTGATGGCCG ATGGTGAGAT CGTGGCCGAC
GGCACCACCG CGGAGGTCAT GCTCGCCTCG CCCGCGTTCG CCCCGCAGGT CGCCAAGGTG
CTGGCCCCGG CACCGTGGCT GACGGTGGAT CAGGTCGCCG CCGCGCTGGT GGCCCAGCGG
GAGCCGGCGT GA
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| Protein sequence | MITFDRVTVR YAEDGPPPLR DVTLTVEEGE LCLVAGRTGA GKSTLLRAIN GLVPHFTGGT
LHGSVTVDGR DTRRHPPRDL ADVVGVVGQD PLSGFVTDTV EEELAYGMEQ LSLPPAVMRK
RVEETLDLLG IAELRNRPLR TLSGGQQQRV AIGAVLTSHP RVLVLDEPTS ALDPTAAEDV
LAAVTRLVHD LGVTVVLAEH RLERVMQYAD RLLYLPGDGR VVDGPPATVL TGVELAPPLV
ELGRLAGWDP LPLSVRDARR RAAELRGRLA EGAPPAPTPA PEPTAALSAR KVVVRYPGTV
AVAGVDLDLQ VGQVVALMGR NGSGKSSLLW AVQGSGPRQG GTVTVTGSAG SVDPKSLPAH
QARRQVGLVP QTPGDLLYLE TVDGECHQAD KETEAAAGTC RALLDQLTPG LPGDRHPRDL
SEGQRLALAL AVQLTAAPPV VLLDEPTRGL DYLAKRQFVS LVRGLAADGR SVVVATHDVE
LVAALADRVI VMADGEIVAD GTTAEVMLAS PAFAPQVAKV LAPAPWLTVD QVAAALVAQR
EPA
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