Gene Strop_4389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4389 
Symbol 
ID5060875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4966891 
End bp4967688 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content71% 
IMG OID640476652 
Productalpha/beta hydrolase fold 
Protein accessionYP_001161195 
Protein GI145596898 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.28701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCGGG TGACGGTTCG TCGAGACGGG GTGGTGCTGT CCTGCCTCGA AGGTGGCGCG 
GGCGACCAGG TGGTCGTGCT GTTGCACGGT CTGGCCGGCA GCGCAGCGGA ACTGGTGCCC
ACGGCGGAGG CGCTGCTACC GGAGCACCAC GTGATCGTGG TGGATCAGCG CGGGCACGGC
TACTCGACCC GACGGCCGCG GGATCTCTCT CGTCGGGCGT ACGTTGAGGA CGTGGTCGCG
GTCGTCGCGG AGCTCACCAG CGGTGCACCG GTGACGATCG TGGGTCAGTC GATGGGTGGG
CACACCGCCC TGCTCGTCGC CGCTGGGTAT CCCGAGCTGG TGCGTCGGCT GGTGCTGCTG
GAGGGCGGAG TCGGGGGCCG CGATGATCGG GGGGACTATC CGGCCGAGCT GGGTGACTTT
TTCACCTCGT GGCCGGTGCC GTTCGCCGAC GTTCGCCACG CGGCCGAGTT TCTGGGCGAC
ACCCCGATCG CCGAGGCCTG GCTGCGGGAC CTGGATCGGC GCCCGGACGG GCTGTGGCCG
CGATTCGAGC CGGAGGTGAT GCGGACCGCT ATCGCGGCCG TCGCGGCCCG GGCCTGCTGG
GACGAGTGGC AGCAGGTGAA GGCGCCCACG TTGCTGGTGC GGGGCGAGCA CGGGATCATT
CCCGCCGCCG AGGTACGGCG AATGGTGTCG CTGCGTCCGG ACGTCGAGCA GGTCGTGGTT
TCTGGCGCCG GACACGACGT CCACTTGGAG GAGCGAGACG CCTGGGTGCG CATCCTGCGG
CAGTTCCTCA GCCGCTGA
 
Protein sequence
MQRVTVRRDG VVLSCLEGGA GDQVVVLLHG LAGSAAELVP TAEALLPEHH VIVVDQRGHG 
YSTRRPRDLS RRAYVEDVVA VVAELTSGAP VTIVGQSMGG HTALLVAAGY PELVRRLVLL
EGGVGGRDDR GDYPAELGDF FTSWPVPFAD VRHAAEFLGD TPIAEAWLRD LDRRPDGLWP
RFEPEVMRTA IAAVAARACW DEWQQVKAPT LLVRGEHGII PAAEVRRMVS LRPDVEQVVV
SGAGHDVHLE ERDAWVRILR QFLSR