Gene Strop_4198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4198 
Symbol 
ID5060682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4765568 
End bp4766092 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID640476459 
Producthypothetical protein 
Protein accessionYP_001161004 
Protein GI145596707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.912124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.759379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTGC GCCACCTACG TAAGCGCTGC AAGCGAGTGG TCGCCGCGCT AGACATGCCC 
GAGACGTTCG ACCTGCCGGA GCTGTGCCGA CTCCTTGGGG AACGCCGGGG ACGACCAATC
CACCTGGTTC CGATCAGCCT GCCGGTGCAC AGCGTGTGCG GCATGTGGGT GCCGACCGAC
ACGTTCGACG CGATCTTCTA TGAGCAGCAC ACCTCGCCGA TCCACCAAAT GCTGATCATT
GGACACGAGC TGGGTCACCT ACTCGCAGGG CACCGGCCCG CCGCCGTACT GGACCCTGAT
GCCTCCAAGC TGCTCCTACC GGACCTCGAT CCCCAAACCG TGCAGCGCTT CCTCGGCCGT
AGCAACTACG CCGCCGAGGA GGAGCGGGAG GCAGAGATGA TCGGGTCTCT CCTGCTACGC
CGGCTCCGCG ACAGTTCGGG CTCCGGGCAG GACACCCCAG GAGACGGTCC TGAGGCCGCC
CTGTACGACC GGCTACGGCA GTCGCTGGAA CACCCCGGCC GGTAG
 
Protein sequence
MTLRHLRKRC KRVVAALDMP ETFDLPELCR LLGERRGRPI HLVPISLPVH SVCGMWVPTD 
TFDAIFYEQH TSPIHQMLII GHELGHLLAG HRPAAVLDPD ASKLLLPDLD PQTVQRFLGR
SNYAAEEERE AEMIGSLLLR RLRDSSGSGQ DTPGDGPEAA LYDRLRQSLE HPGR