| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4061 |
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| Symbol | |
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| ID | 5060543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4619891 |
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| End bp | 4620844 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640476322 |
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| Product | NADH dehydrogenase subunit E |
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| Protein accession | YP_001160869 |
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| Protein GI | 145596572 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
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| TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.732889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.108394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGACG CAGTCGCGAA CGGAAAGGGG GCACCGATGA CCGTGTTTTC CGAGGAGACC
CGGGCGCGGG CCCGGGAGAT CATCGCCCGG TATCCGGCCG ATCGGTCCCG CTCGGCGTTG
CTGCCGCTGC TGCATCTGGT GCAGTCGGAG GAGGGGTATG TCTCCCCGGC CGGCATCGCG
TTCTGCGCCG AGGTGCTGGG GTTGAACAAG GCCCAGGTTG GTGCGGTCGC CTCGTTCTAC
ACAATGTACA AGCGTCGGCC GACCGGCGAC TGGCTGGTCA GCGTCTGCAC CAACACGATG
TGCAACGTGC TGGGCGGCCA GGAGGTGTAC GACGCCCTGG TCGAGCACCT CGGCGTCGGG
CACGAGGAGA CCACGGCCGA CGGCACGGTC ACGCTGGAGC ACGCCGAGTG CCTGGCGGCG
TGCGACTACG GACCGGTGAT GACGGTCAAC TACGACTTCT TCGACAACGT GGACCCGCAG
ACGGCGGTCG GCGTGGTTGA CGAGCTGCGG GCCGGTAGCC GGCCGACGTC GAGTCGTGGG
GCTCGGCTCT GCCGGCTGAA GGAAATGTCG GTGCAGCTCG CCGGCTTCGC TGACGAGCGC
GAGGGCGCGG TCGCCGACGG GGTACCCGGC GAACCGACCG TGGCCGGGCT GCGGCTCGCG
CAGGAGCACG GCATCGCGGT CACCGGCTAC GACCCGAACA CGCCGATCCT CAGCAAGGCC
GAGGCCGAGC AGGCAGCCGC CAAGGCGAAG GCCGAGGCCG CCAAGCCCGC CGCCGCTCCG
GCTGGCTCGG CCGCCGAGGC GAGCCGGCCG GCCGGCTTCG CCAAACCCGC CAGTGACGCC
AAGCCCGCGG GGGATGAGGC GCCGGTGAAG GAGCGCTCGT TGAAGGACGC AGCGGCGGGC
ATGGGAGATG CGGCGGGCTC CCCAGCCGGA AACGAAAGGG GCGCAGACCA GTGA
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| Protein sequence | MSDAVANGKG APMTVFSEET RARAREIIAR YPADRSRSAL LPLLHLVQSE EGYVSPAGIA
FCAEVLGLNK AQVGAVASFY TMYKRRPTGD WLVSVCTNTM CNVLGGQEVY DALVEHLGVG
HEETTADGTV TLEHAECLAA CDYGPVMTVN YDFFDNVDPQ TAVGVVDELR AGSRPTSSRG
ARLCRLKEMS VQLAGFADER EGAVADGVPG EPTVAGLRLA QEHGIAVTGY DPNTPILSKA
EAEQAAAKAK AEAAKPAAAP AGSAAEASRP AGFAKPASDA KPAGDEAPVK ERSLKDAAAG
MGDAAGSPAG NERGADQ
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