| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3967 |
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| Symbol | |
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| ID | 5060448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4518881 |
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| End bp | 4519789 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640476227 |
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| Product | DNA primase, small subunit |
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| Protein accession | YP_001160775 |
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| Protein GI | 145596478 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.641256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACC GGCTCCGGGT CGACGTGGCT GGCCGCACCC TGGAGTTGTC GAATCTGGAC
AAGGTGCTGT ACCCCGCGAC CGGGTTCACC AAGGGTGAGG TGATCGACTA CTACACCCGG
GTCGCTCCGG TGCTCCTGCC GCACCTGTCC GACCGGGCGC TGACCCGAAT CCGGTTCCCG
AACGGCGTCG ACGGCAGCTC CTTCTTCGAG AAGAACGCAC CCGCGGCGAC ACCGAGCTGG
GTACGCACCG AGACGTTGCC CGTCCCCGGC TCGGCGAAGG GCCGGGAGAC GATCGACTAT
GTGGTCGCCG ACGAGCTACC GACCCTGGTC TGGTTGGCAA ACCTCGCCGC CCTCGAACTC
CACACGCCAC AGTGGCAGAT CGGGGCACAT CCGGACCTGA TGGTGGTTGA CCTCGATCCC
GGTGAGCCGG CCGGGCTACG CCAGGGTTGT CAGGTAGCCC TGTTGCTGCG GGAGCGGCTC
GCCGACGACG GGATCGAGGC GTATCCGAAA ACCTCGGGGA AGAAGGGGAT GCAGCTCTGC
TGCCCGATCG CCGGTACCCA ACCGGCCGAC GTCGTCTCCG GCTACGCGCG ACGGATCGCC
CAGGAGTTGG AGCGGGCCCA TCCGAGTCTG GTCGTGTCCA AGATGGCGCG AAAGCTACGG
GCGGGAAAGA TCTTCATTGA CTGGAGTCAG AACAACGCGG CGAAGACGAC GGTGGCGCCG
TACTCGCTGC GTGCGCAGTC GGTGCCGGCG GTGTCCACCC CGCTGACCTG GGCCGAGGTG
GAGGCCGGTG GGGCCGGCAA ACGGCCGTCG GTCAGGCCGT ACGCGGCGGC CGAGGTGCTC
ACCCGGGTTG CGGAGCAGGG CGACCTGCTC GCCCCGCTCC TTGCCGGCGG CCCCGAGCTG
CCGGGATAG
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| Protein sequence | MSDRLRVDVA GRTLELSNLD KVLYPATGFT KGEVIDYYTR VAPVLLPHLS DRALTRIRFP
NGVDGSSFFE KNAPAATPSW VRTETLPVPG SAKGRETIDY VVADELPTLV WLANLAALEL
HTPQWQIGAH PDLMVVDLDP GEPAGLRQGC QVALLLRERL ADDGIEAYPK TSGKKGMQLC
CPIAGTQPAD VVSGYARRIA QELERAHPSL VVSKMARKLR AGKIFIDWSQ NNAAKTTVAP
YSLRAQSVPA VSTPLTWAEV EAGGAGKRPS VRPYAAAEVL TRVAEQGDLL APLLAGGPEL
PG
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