Gene Strop_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3840 
Symbol 
ID5060318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4399584 
End bp4401179 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content73% 
IMG OID640476097 
Productoxidoreductase, molybdopterin binding 
Protein accessionYP_001160648 
Protein GI145596351 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGTA CGACCAGTCG CCACGCCGCT TTGGCCGGGG TGATCGCCGC CGCGGTGGCG 
ATCGGCTCGG CAGAGCTCGT CGCGGTGTTG ACCGGCCCCC GTTCCGCTCC CCTGGTAGCC
GTCGGCGGGC TGGTGGTCGA CACCGTGCCG GAGCCACTCA AGCAGTTCGG CATCGCGCTC
TTCGGCAGCT ACGACAAGAT TGCCCTGCTG GTGGGGACGG CCCTGCTGCT CGCCGGCTTC
GCCGCGCTGC TCGGCGTACT GTCCCGGCGG CACCTGGCGT ACGGGCTGGC CGGCATCACG
GCGTTCACGG CGCTGGGGGC GTTCGCAGCC CTGACCCGAG CCGGTGCGGA CCTCGCGGAC
GTGCTGCCGG CGCTGGCCGG CGGCAGCCTC GGCGGCCTGG TGCTCTGGGC GTTCGTCCAG
GGACCGTTGG AGCTGGATCC ATGGCCCTGG TCTGCCCCCA CCCCACCGGC CGCCTCCGGT
GCGCCGGATG CCGGGTCGGC TGACCGGGAG CAGGCCGCGG GGCCGAGTCC GGAATCACGA
CGACGCTTTC TCACCGCGAG TGGGCTCCTG CTCGGGGCGG CGGGAGCGGC CGGTATCGGC
GGCCGGTGGC TGACCGGTCG GCGGGGGGTG TCGGCGGCCC GCGCGGCGGT CGTGCTGCCG
GCCCCGGCGT CGCCAGCCTC CGCTGTGCCG ATCGGTGCCG ACCTGAACCT GCCCCAGCTT
GCCTCCTACG TCACGCCCAG ATCCAGCTTC TACCGGATCG ACACCGCCCT GGTGGTGCCG
CAGGTGGATC CGGCCACCTG GCAGTTGCGC ATCCACGGCC GGGTTCGCAA CCCGATCACC
CTGAGCTTCG CCGACCTGCT GGCCCGGCCG CTGGTCGAGC GGTATGTCAC GTTGGCCTGT
GTGTCGAATG AGGTCGGCGG TGACCTGATC GGCAACGCCC GCTGGCTGGG GGTGCCGCTG
CGGGATCTGT TGGCCGAGGC GGATCCGCTG GCGGGCGCGG ATCAGGTCGT TGGGCGGTCG
GTTGACGGCT GGACCTGCGG TACCCCCACG GCGGTGCTGC GGGACGGCCG GGACGCGCTG
CTGGCGGTTG GCATGAACGG TGAGCCGCTG CCGGTCGAGC ACGGCTTCCC GGTCCGGATG
GTGGTGCCGG GCCTGTACGG CTACGTGTCG GCCTGTAAGT GGGTCACCGA GCTGGAGTTG
GCCAGCTTCG CGGACTTCGA CGCGTACTGG GTGCCACGCG GTTGGTCGGC GCAGGGCCCG
GTGAAGACCC AGTCGCGGAT CGACACGCCG CGTCGGCGGA GTCGGTTGGT GGCGGGGGAG
GTGGTTGTCG CCGGTGTCGC CTGGGCGCAG CACCGGGGCA TCCGGCGGGT GGAGGTCCGG
GTGGACGAGG GGCCCTGGCG GGAGGCGGAC CTCGCGCCGA CGGTCTCGGT GGATACCTGG
GTGCAGTGGT CGTGGCGGTG GGACGCGACA CCGGGCGAGC ACACGCTTGC GGTGCGGGCC
ACCGACGCGA CCGGTGAGAC GCAGACCGGC CGTAGCGCGC CGGTGGCTCC GGACGGCGCG
ACCGGCTGGC ACACGGTGCG CGTGACAGTT GGCTGA
 
Protein sequence
MTSTTSRHAA LAGVIAAAVA IGSAELVAVL TGPRSAPLVA VGGLVVDTVP EPLKQFGIAL 
FGSYDKIALL VGTALLLAGF AALLGVLSRR HLAYGLAGIT AFTALGAFAA LTRAGADLAD
VLPALAGGSL GGLVLWAFVQ GPLELDPWPW SAPTPPAASG APDAGSADRE QAAGPSPESR
RRFLTASGLL LGAAGAAGIG GRWLTGRRGV SAARAAVVLP APASPASAVP IGADLNLPQL
ASYVTPRSSF YRIDTALVVP QVDPATWQLR IHGRVRNPIT LSFADLLARP LVERYVTLAC
VSNEVGGDLI GNARWLGVPL RDLLAEADPL AGADQVVGRS VDGWTCGTPT AVLRDGRDAL
LAVGMNGEPL PVEHGFPVRM VVPGLYGYVS ACKWVTELEL ASFADFDAYW VPRGWSAQGP
VKTQSRIDTP RRRSRLVAGE VVVAGVAWAQ HRGIRRVEVR VDEGPWREAD LAPTVSVDTW
VQWSWRWDAT PGEHTLAVRA TDATGETQTG RSAPVAPDGA TGWHTVRVTV G