Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3758 |
Symbol | |
ID | 5060236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4308600 |
End bp | 4309706 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640476016 |
Product | N-succinyldiaminopimelate aminotransferase |
Protein accession | YP_001160567 |
Protein GI | 145596270 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03539] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CTGAACCGGC CCACGCCGGT CTCGGCTCGG CTGCCGGAGT TCACCTGGGA CGCCCTGGAC GCCGCGGCCG CTCTGGCCGC GGCGCACCCG GGGGGCCTGA TCAACCTCTC CATCGGTACG CCGGTCGACC CGGTGCCGCC GTCGATTCGG CAGGCGCTGG CGGACGCGTC GGACGCTCCC GGATACCCGC TGACCGCCGG CTCGCCGGCG CTGCGGACCG CGATGGCGGC CTGGGCGGCG CGGGCCTGCG GTGCCAACCC GGAGGGGCTG GGCGTGCTTC CGGTCGTGGG GTCGAAGGAA CTGGTCGCCT GGCTACCCAC GCTGCTCGGG ATCGGGCCGC AGGACGTGGT CGTGGTGCCG TCGGTCGCGT ACCCGACCTA CGAGGACGGG GCTCGGCTCG CCGGGGCGAC CGTCGTACGG TCTGATTCGT TGACCGCCCT CGGTCCGACC CCCCGGGTCC GCCTGGTCTG GGTGAACTCG CCGGGGAACC CGACGGGGCG GGTGCTGCCC GCCGCCCACC TGCGCAAGGT GGTCGACTGG GCCCGTGAGC GCGGTGCGGT CGTCGCCAGT GACGAGTGTT ACCTGCCGTT GGGCTGGGAG GCCGAGCCGG TCTCGGTGCT GTCGCCACAG GTCTGCGGCG ACTCGTACCG CAGCGTCCTG GCGGTGCACT CGCTGTCGAA GCGCTCCAAC CTCGCCGGCT ACCGGGCCGG CCTTGTGGCC GGTGACCCGG TGCTCGTCGC CGAGCTGCTC AAGGTGCGCA AGCACGCTGG CATGATCATG CCAGCGCCGG TTCAGGCCGC GATGGTGACC GCCCTCCAGG ACGAGCGGGA CGCCACCGAG CAGCGGGAGC GCTACCGAGC CCGGCGTGCC GTGCTGCGCG CCGCATTCAC CGCCGCCGGA TTTACCGTCG AGCACTCGGA GGCCGGCCTC TATCTGTGGC TGACCCGGGA CGAGGACTGC TGGGCCACGG TCGACTGGCT GGCCCGGCGG GGCATCCTGG TAGCGGCGGG TGCCCTCTAC GGGCCCACCG GCGCTCGGCA CGTCCGGGTG GCGTTGACCG CGTCCGACCA ACACGTGGCG GCGGTCGCCG ACCGGCTGAC CGGCTGA
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Protein sequence | MNRPTPVSAR LPEFTWDALD AAAALAAAHP GGLINLSIGT PVDPVPPSIR QALADASDAP GYPLTAGSPA LRTAMAAWAA RACGANPEGL GVLPVVGSKE LVAWLPTLLG IGPQDVVVVP SVAYPTYEDG ARLAGATVVR SDSLTALGPT PRVRLVWVNS PGNPTGRVLP AAHLRKVVDW ARERGAVVAS DECYLPLGWE AEPVSVLSPQ VCGDSYRSVL AVHSLSKRSN LAGYRAGLVA GDPVLVAELL KVRKHAGMIM PAPVQAAMVT ALQDERDATE QRERYRARRA VLRAAFTAAG FTVEHSEAGL YLWLTRDEDC WATVDWLARR GILVAAGALY GPTGARHVRV ALTASDQHVA AVADRLTG
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