Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3470 |
Symbol | |
ID | 5059939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3978632 |
End bp | 3979492 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640475719 |
Product | degV family protein |
Protein accession | YP_001160279 |
Protein GI | 145595982 |
COG category | [S] Function unknown |
COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.748591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTCG CGGTTGTCAC CGACTCCACC GCCTACCTTC CCCCTGGGCT GCTGGCCATG CACCAGCTAA CGGTGGTGCC CTTGACCGTC GTGCTCAACG GAGTGGAAGG GCGGGAGGGG GTGGAGACCT TCCCCGCCGA CGCTACCCGA GCCCTGAGTG GGCGGCGGGT GTCGGTCAAC ACCTCCCGGC CGGCCCCCGC GCAGTTTGTG CGCGCGTACC GCCGGCTTCT CGACGGTGGT GCCGACGGCA TCGTCTCGGT GCATCTGTCC GCAGGGCTCT CCGGCACTGT CGAGTCCGCG CGCCTGGCCG CCGCGGAGTT CGGCGACCGA GTGGCGGTGG TGGACAGCCG CTCCTGCGGC ATGGGCATCG GATTTCCCGC GCTGGCTGCT ACCGAGGCCG CGGCGGCCGG TGCCGACCTG ACCGCGGCTC GTATCGTTGC CGAGCGGGCC ATAGCGCGGA CCACCGTCTA CTTCTACGTC GACACGCTGG AGTTCCTCCG TCGGGGTGGC CGGATCAACG CCGCCTCGGC GTTGCTCGGC ACTGCTCTCT CAGTGAAGCC GATCATGCAC ATGCCAGACG GCGTGATCGT CCTCCGGGAC CGGGTGCGCA CCGCCAGCCG GGGCATCGCC CGTCTGGTAG ACCTCGCTGT CGAGGCCGCC GGGGATGCCG ATGTTGACCT GGCTCTGCAC CATCTCGCGG CACCGCAGCG CGCCGAGGCA CTCCAGGCGG CGTTGGCCGC GCGGCTCGGT GACTGCCTGC GGAGCACCTA CGTCTCGGAG GCCGGTGCGG TGGTCGCCGC GCATGCGGGG CCCGGCCTGG CCTGCGTGGT CGTGCATCGC CGTCCGCCAG CCGGAGACTG A
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Protein sequence | MPVAVVTDST AYLPPGLLAM HQLTVVPLTV VLNGVEGREG VETFPADATR ALSGRRVSVN TSRPAPAQFV RAYRRLLDGG ADGIVSVHLS AGLSGTVESA RLAAAEFGDR VAVVDSRSCG MGIGFPALAA TEAAAAGADL TAARIVAERA IARTTVYFYV DTLEFLRRGG RINAASALLG TALSVKPIMH MPDGVIVLRD RVRTASRGIA RLVDLAVEAA GDADVDLALH HLAAPQRAEA LQAALAARLG DCLRSTYVSE AGAVVAAHAG PGLACVVVHR RPPAGD
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