Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3149 |
Symbol | |
ID | 5059613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3614836 |
End bp | 3615810 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640475396 |
Product | inner-membrane translocator |
Protein accession | YP_001159961 |
Protein GI | 145595664 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.766269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.537762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACTTCG ATGCCTTATT CGGCGACCTC GCTCAGCACA CTGTTGACGG CTTGTCCAAG GGGGCGATCT ATGCCCTCGT CGCCCTGGGG TACACGCTCG TCTATGGTGT GCTCCGTCTG ATCAACTTCG CGCACTCTGA GATCTTCATG GTGGGTACCT TCGCGATCCT CGGCACCTGG TCGCTGCTCG GGGTGGCCGA CAACCCGCCG ATCGGGATGG CGATCGTCTA CCTGCTCATC GGTCTGGTGG TCGGTGCGCT GGCCTCGGGT GCCACCGCAC TCACCGTCGA ACGGGTCGCC TACCGGCGAC TACGCCGGAT GAACGCGCCG CCGCTGATCT TCCTGATCAC CGCCATCGGG CTCTCGCTCG TCCTGGTGGA GATCTTCGCG CTGTGGATGG CAGGGTTCTT CTCGGGGCGT GGATTCACCG AGAACCGACT CGTGATCGGG ATTCCGCCGC TGCTGAAGCA GGAGACAGTG CTCTCGGTGG CGGGTGCCGA CATCACCAAC GTACAGATCA TCATGGTGCT CTCCGCCCTC CTGATGCTCT ACGGGTTGGA CCAGTTCATC AACCGGACGC GGTACGGACG CGGGGTGCGG GCCGTGGCAC AGAGCCCGGA CACCGCCGCG CTGATGGGGG TGCACCAGGA CCGAGTGATC ATGCTGGTCT TCGTCCTGGG TGGATTGATG GCGGGCGCCG CGGCCCTGTT GTGGAACATG CGGTACGGGA TCACCAAGTT CGACATCGGC TTCGTGGTCG GGCTGAAGGC GTTCACCGCG GCGGTGCTCG GTGGTATCGG CAACCTCCGT GGCGCGCTGC TCGGTGGCCT GCTACTCGGG GTCATCGAGG TGTACGCGGC GACGTTGACC CGATCCACCT GGGAGGATGT TGCCGCCTTC GTGGTGCTCG TGGTGGTGCT GATCTTCCGC CCGACCGGCC TGCTCGGTGA GTCTCTCGGA AAGGCGAGGG CATGA
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Protein sequence | MNFDALFGDL AQHTVDGLSK GAIYALVALG YTLVYGVLRL INFAHSEIFM VGTFAILGTW SLLGVADNPP IGMAIVYLLI GLVVGALASG ATALTVERVA YRRLRRMNAP PLIFLITAIG LSLVLVEIFA LWMAGFFSGR GFTENRLVIG IPPLLKQETV LSVAGADITN VQIIMVLSAL LMLYGLDQFI NRTRYGRGVR AVAQSPDTAA LMGVHQDRVI MLVFVLGGLM AGAAALLWNM RYGITKFDIG FVVGLKAFTA AVLGGIGNLR GALLGGLLLG VIEVYAATLT RSTWEDVAAF VVLVVVLIFR PTGLLGESLG KARA
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