Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3008 |
Symbol | |
ID | 5059472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3439431 |
End bp | 3440396 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640475258 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_001159823 |
Protein GI | 145595526 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCCCGC GTCGCCCACG CTCCTCCCGC CCCGACTGTC GCTGCTCGTC ACATGCCGGG CCGAGCAGGC ACTCCGGTCG AGCAGGCACT CCGGTCGAGG AGGGCGTCCG GCCGGGTGGG CGGGGTGTCG TCAACGGCGT CCGGCAGAAT CGTCCGGTGC CCGTCCACCA GATCACCGAC CCCGACGACG ACCGGATCGC CGACTACCGC GCGCTCACCG ACGTGGAGCT GCGGACCCGC TGGGAGCCAC CGCACGGCCT CTTCATCGCC GAGGGCGAAC TGGTGTTGCG GCGAGCGCTG CGCGCCGGCT ACCCGGCCCG GTCCTACCTG GTGGACGCCA AGCGGGTGGA GCAGATCGCC GACCTGCACA CCGGCGAGGC CCCGGTCTAC GCCGCCACCC CGGACGTGCT GCGCCAGATC ACCGGCTTCC ACGTACACCG GGGCGTTTTG GCGTCGTTTC GTCGCCAGCG GCAGCCGACG GCCGCCGAGG TGCTCGGCAC CGCCCGCCGG GTGGTGATCC TCGAAGACGT GAACAACCAC ACCAACCTCG GCTCGATCTT CCGGGCCGTC GCCGGGCTCG GTGTGGACGC GGTGCTGCTC TCCCCGACCT GCGCCGACCC GCTCTACCGC CGTAGCGTCC GGGTCAGCAT GGGGGAGGTG TTCGCCGTGC CGTACGCGAC GCTCGGCCCC TGGCCCGACG CGCTCGCCGA GGTCCGCGCC GCCGGCTTCT CCGTGCTGGC CCTGACCCCC GCCCCCGACG CGGTGCCGAT CCAGCGCCTT GAACCAGGCC AGCGGGCCCG GGCGGCGCTG CTGCTCGGCG CGGAGGGCTC GGGCCTGACC CGGGAGGCGA TGGAGGCCAG CGACGTCCGG TTGGTCATCC CGATGCGCCG CAGCGTCGAC TCGCTCAACG TCGCCGCCGC CACCGCCGTC GCCTGCTGGG AACTGGGCCG GGACGACCCG CTCTGA
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Protein sequence | MSPRRPRSSR PDCRCSSHAG PSRHSGRAGT PVEEGVRPGG RGVVNGVRQN RPVPVHQITD PDDDRIADYR ALTDVELRTR WEPPHGLFIA EGELVLRRAL RAGYPARSYL VDAKRVEQIA DLHTGEAPVY AATPDVLRQI TGFHVHRGVL ASFRRQRQPT AAEVLGTARR VVILEDVNNH TNLGSIFRAV AGLGVDAVLL SPTCADPLYR RSVRVSMGEV FAVPYATLGP WPDALAEVRA AGFSVLALTP APDAVPIQRL EPGQRARAAL LLGAEGSGLT REAMEASDVR LVIPMRRSVD SLNVAAATAV ACWELGRDDP L
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