Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2636 |
Symbol | |
ID | 5059099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2957835 |
End bp | 2958611 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640474892 |
Product | short chain dehydrogenase |
Protein accession | YP_001159458 |
Protein GI | 145595161 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.842689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.311906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCTCA CGGAGAAGAT CGTCGTGGTG GCCGGGGTCG GCCCCGGGCT GGGCCAGGCC ATCGCGGTGC GTGCCGCGCA GGCCGGTGCC CACGTGGTGC TCGCCGCCCG CACCGGGTCC TTCCTGAACG GGGTGGCCGG CAAGGTGCGG GCGGCAGGTC AGCGGGCCCT GGCGGTACCC ACCGACCTCA CCGACGGCGA GTCGAGCGCC GCACTCGTGC GGGCCGCCCT CGCCGAGTTC GGCCGCGTTG ACGTGCTGGT CAGCAACGCG TTCGAGATGC CGCCGATGCG GGGTCTCGGG ACGGTCGAAC TGGCTGACCT ACGATCGAGC TTCGAGGTCA ACGTGCTTGC GGCGCTGCGT ATGACTCGGC TGCTGACGCC CGCGTTGGTG GAGTCCGGCG GCAACGTGGT CATGGTCAAC TCCGCGGTGC TGCGCCACTC CCGTCTGGCG TTCGGCCCGT ACAAGCTGGC CAAGGCCGCG CTGCTCGCGG CGGCGCAGAA TCTGGCCACT GAACTCGGGC CGAGGGGCGT GCGGGTCAAT TCGGTCGCAC CCGGCTGGAT CTGGGCCGAC AGCCTGCGGC TCTGGTTTGA CTACCAGGCG AGTCAGCGTG GCGTGCCGCC CCAGCAGATC TACGACGAGG TCGCCGCTAC CACCGACCTG GGCCGGCTGC CCGTGCCGGA CGAGGTCGCT GACGCCGTGC TGTTCCTCAG CTCCGGTCTG GCTCGCGGCA TCACTGGTCA GTGCCTCGAC GTCAACTGCG GCGAGTTCCA TCACTGA
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Protein sequence | MLLTEKIVVV AGVGPGLGQA IAVRAAQAGA HVVLAARTGS FLNGVAGKVR AAGQRALAVP TDLTDGESSA ALVRAALAEF GRVDVLVSNA FEMPPMRGLG TVELADLRSS FEVNVLAALR MTRLLTPALV ESGGNVVMVN SAVLRHSRLA FGPYKLAKAA LLAAAQNLAT ELGPRGVRVN SVAPGWIWAD SLRLWFDYQA SQRGVPPQQI YDEVAATTDL GRLPVPDEVA DAVLFLSSGL ARGITGQCLD VNCGEFHH
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