Gene Strop_2625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2625 
Symbol 
ID5059088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand+ 
Start bp2947764 
End bp2948384 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content69% 
IMG OID640474881 
Productregulatory protein, TetR 
Protein accessionYP_001159447 
Protein GI145595150 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.232365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.311906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCGT CGAGAACACA TACCAGAAGC CCGAGCGCTG GCAGCCTGAC CGACGCCGAG 
CAAGGATCGG CGGCGCAGCG GGAGCGCCGA CGGCGCATCC TGGACGCCAC CCTCGTCCTG 
GCCTCCAGGG GTGGATACGA CGCGGTGCAG ATGCGCGCCG TCGCCGAACA CGCCAACGTC 
GCCCTCGGCA CGTTGTACCG CTACTTCCCC TCCAAGATCC ACCTCTTGGT TTCCGCCCTG 
GCCCGGGAGT TCGAGCGGAC GCAGGACAGA CTCCGTCGCA CCGCCATTCC GGGTGAGACG 
CCACACGAGA GGACCGCGTT CGTCCTCGGC CGGGTCACCC GCGCCATGCA GCGCGACCCC 
ATGCTGACCG AGGCGATGAC CCGGGCGTTC ATGTTCGCCG ACCCGACCGC AGCCACCGAG 
GTCAACGCCG TCGCACGGCT CATGGAAGAC ATGTTCATCC TGGCCATGCG GGAGGGCAAG 
CCATCGGCGG ACGACCGGGC CAAGGCCCGC GTCATCGGCG ATGTCTGGCT CTCCAGCCTG 
GTCGCCTGGG TCACCCGACG GGCCTCGGCC AACGACGTGC ACGAGCACCT CGAACTCGCG 
GCACGCCTAC TGCTGCGCTG A
 
Protein sequence
MVASRTHTRS PSAGSLTDAE QGSAAQRERR RRILDATLVL ASRGGYDAVQ MRAVAEHANV 
ALGTLYRYFP SKIHLLVSAL AREFERTQDR LRRTAIPGET PHERTAFVLG RVTRAMQRDP 
MLTEAMTRAF MFADPTAATE VNAVARLMED MFILAMREGK PSADDRAKAR VIGDVWLSSL 
VAWVTRRASA NDVHEHLELA ARLLLR