Gene Strop_2415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2415 
Symbol 
ID5058878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2712267 
End bp2712767 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content66% 
IMG OID640474674 
Producthypothetical protein 
Protein accessionYP_001159240 
Protein GI145594943 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.696624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGACT GGCGGGCGGT CTTCACGCCG GACACTCCGC TGATGGAGAT CATCGTCCGG 
GGCAGCGTGA TGTACCTGAC GCTGTTCTTC CTGCTGCGGG TCCTGCTGAA ACGGGAAAGC
GGCACCACCG GAATGACCGA CCTGCTGGTC ATCGTGCTGA TCGCCGACGC CGCGCAGAAC
GGCATGGCAA GCGGCTACAC CTCGCTCGCC GACGGGGTGC TGCTGGTCGC GGTGATCATC
GGTTGGGCAT ACCTGCTCGA CGCGGTCGCC TACCGCTGGC AACCCGCCGC CCGACTGATC
CGACCGAAAC CCCTGGCCCT GGTCCGGGAC GGACGGATGC TGCACCGCAA CATGCGTCGG
GAACTGGTCA CCGAAGACGA GCTGTACGGG CAGCTGCGGG AGCAGGGCAT CGACAGCCTG
GCTGAGGTCC GGGAGATGCG GATGGAGTCC GACGGCCAGT TCAGTGTGAT CACCCGTCGC
CCCGGCAAGC AACGACCCTG A
 
Protein sequence
MVDWRAVFTP DTPLMEIIVR GSVMYLTLFF LLRVLLKRES GTTGMTDLLV IVLIADAAQN 
GMASGYTSLA DGVLLVAVII GWAYLLDAVA YRWQPAARLI RPKPLALVRD GRMLHRNMRR
ELVTEDELYG QLREQGIDSL AEVREMRMES DGQFSVITRR PGKQRP