Gene Strop_2292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2292 
Symbol 
ID5058755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2585351 
End bp2587255 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content68% 
IMG OID640474554 
Productradical SAM domain-containing protein 
Protein accessionYP_001159120 
Protein GI145594823 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.727503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCG TCCTGGTCAG CATGCCCTGG GGATCGATCG ATGTTCCGTC GCTGGCGCTG 
GGCATCCTGC GCACGGCAGC CAGCCAGGGT GGCCACGAGG TGCAGGTTCG CTACGCGAAC
CTCGACTTCT TCGACTGGGC GGCCCGGGTC ACCAACCTCA CGCTCGCCGA CTACCAGTAC
TTCTCCGAGT CCTCCTACTT CCTCGGCGCC GGCGACTGGG TCTTCTCCGG ACTACTCGAC
GACTCGGACC GGTCGTTCGA CTCCTACGCC CGGCTCCTGG CCCGCAACGG TACGGCCGAC
GCCGAGATCG CGCAGACCGG GTCGATGCAC CGGGTGGTGC CCGAGTTCAT TCGCGGACTC
GCGGCCGAAC TGGCGGCCAC GACGCCCGAC GTCGTCGGTT TCACCACCAC GTTCCAGCAG
AATGCCGCCA GCCTCGCCGT CGCCCGGCTA CTCAAACAGC TACGGCCGCA GACCCGCATC
GTGTTCGGTG GGGCCAACTG CGACGGGCCG CAGGGGGCGG CACTGCACCG CAACTTCCCC
TACGTCGACT ACGTCGTGCG GGGTGAGGGC GAGGTCGCCT TCCCACACCT ACTCGACGCG
CTCGATCCAC TGACCGCCGC ACCCGACCGG ACGAAGCTGG CCAGGATCTC TGGCCTGTGC
TGGCGGGACC GGGACGGAAC GGAACGGGCC AACCCGATGT CGTCCACTCC CCTGCCGCCG
GCCCACATCG TCGCTCCCGA CTACACCGGC TACCTGGAAC GGCTAGACGC GTCGGCAGCA
GCCGACTGGG TGGCGCCCAA ACTAGTGGTC GAAGGCTCCC GCGGTTGCTG GTGGGGCGAG
AAGCACCACT GCACGTTCTG CGGGCTCAAC GGGTCGTTCA TGCAGTTTCG CAGCAAGAGC
CCGGCCCGGT TCCTCGACGA GCTCCTCGAC CTCGCACGGC GCCACCAACT GCTCGACTTC
ATCGTCGTCG ACAACATCCT GGATATGGCC TACTTCGACT CGGTGCTGCG GTGGCTGGCC
GAATCGGAGT ACGACCTGCG CCTCCACTTC GAAGTCAAGG CCAACCTGCG CCGGCACCAC
TTCCAGCAGC TGAGCGACGC CGGTGCGGTG CAGGTCCAGC CAGGGGTGGA GAACCTCAGC
AGCAATGTGC TGCGGCTAAT GGACAAGGGC GTCACCGGTT GCCAGAACGT CCGGGCGTTG
CGCGATGCGC AGAGCGCCGG TGTGACCGCG AGCTGGAACT ACCTGTACGG GTTCCCGGGC
GAGACGGCGC AGGACTACAC CAGCGTCCTC GCGCAGCTGC CGGCGCTCCA CCATCTGGAG
CCGCCGATCA GTTCGACCCG GATCGCCATT GAGCGGTACA GCCCCTACTT CGACCGCCCC
GAACTGGGGT TCGCCAGCCT GCGGCCGGCC CCCCAGTACG CCGAGATCTA CCGGCTGCCC
GAGACCGAGC TCGCCGACCT GGCGTACGTC TTCACGTCGC CGCCGAAGGG CATCGACCGA
ACCCTGGCCG CCGAACTCGA CGCGGCCCTC GCCACCTGGC AGGCGCGGTA TCCGATCAGC
CGGCTCACGT ACCAGGAACT TGCCGACCGG ATCGTGCTGG TCAGCCGACG CGCCAGCTTT
GACTGGACCG TACTGGAGCT GACCACGCCC GCCGAGATCG AGCTGTTTCG GCTGCTGGGC
CAGCCCCGTA CGGTCGCGAC CCTCGTCGCC AAGGTGCCAG GCGGGGCGGC GGTCGTCGAA
CCGTTGCTGT CCCGGTGGGC TGCGCTGGGC CTGCTGTTTC ACGACGGCGG CTACCAGGTG
CACCTCGCCG TGGAGTCCAA CAACCAGGTA CTGACCCGGA TCGAACACCG CCGAGTAGCC
GCCCAGCGAG CTGAGGAGGA ATCGCGTGCC ACCGTCGTCG CCTGA
 
Protein sequence
MKVVLVSMPW GSIDVPSLAL GILRTAASQG GHEVQVRYAN LDFFDWAARV TNLTLADYQY 
FSESSYFLGA GDWVFSGLLD DSDRSFDSYA RLLARNGTAD AEIAQTGSMH RVVPEFIRGL
AAELAATTPD VVGFTTTFQQ NAASLAVARL LKQLRPQTRI VFGGANCDGP QGAALHRNFP
YVDYVVRGEG EVAFPHLLDA LDPLTAAPDR TKLARISGLC WRDRDGTERA NPMSSTPLPP
AHIVAPDYTG YLERLDASAA ADWVAPKLVV EGSRGCWWGE KHHCTFCGLN GSFMQFRSKS
PARFLDELLD LARRHQLLDF IVVDNILDMA YFDSVLRWLA ESEYDLRLHF EVKANLRRHH
FQQLSDAGAV QVQPGVENLS SNVLRLMDKG VTGCQNVRAL RDAQSAGVTA SWNYLYGFPG
ETAQDYTSVL AQLPALHHLE PPISSTRIAI ERYSPYFDRP ELGFASLRPA PQYAEIYRLP
ETELADLAYV FTSPPKGIDR TLAAELDAAL ATWQARYPIS RLTYQELADR IVLVSRRASF
DWTVLELTTP AEIELFRLLG QPRTVATLVA KVPGGAAVVE PLLSRWAALG LLFHDGGYQV
HLAVESNNQV LTRIEHRRVA AQRAEEESRA TVVA