Gene Strop_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2213 
Symbol 
ID5058676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2505434 
End bp2506576 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content69% 
IMG OID640474476 
Producthypothetical protein 
Protein accessionYP_001159042 
Protein GI145594745 
COG category[C] Energy production and conversion
[G] Carbohydrate transport and metabolism 
COG ID[COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTCC TCTTCCTCAC CACCGGCAGC CACGTCACCG TCTATGCGAT CGCCGCCCTT 
GCCCACGCGG TACGCAACGC GGGGCACGAC GTACTGGTGG CCACGAACGA GCCGCTCATT
GACGCGGTGG AGACGGTCGG CCTACCCGGG GTGTCGATCA CCTCGGAGTC GATCCGGCAC
TTCCTCGCCA CCGTCGACTC AGCGGACGAG ATGGTGGTCA CCGGCCGCGG TCTGGGGAGG
ATGGCCTCCG CCACGCTGGT ACGGCTCGGT GAGCTGGCGC AGGACTGGGC GCCGGACGTC
ATCGTCGGCA GCTCGATGAG CTACGCGGCG GGACTGCTCG CCGCGACACA GGGTATTCCC
TTCGTGCGTC ACATCGAGTA TCTGCAGATT CCGATGGCGG AGATCGACCC GGTGGCGGAG
GAGGAGCTCA CGCCGGAGCT GACACGCCGG GGTCTGGGCG GCCTGCCCGA GCCCGACCTG
TTGATTGATG TCAGTCCGCC ATCGCTACGG TCGCCCCCCG CAGCCGGCGT GCACCCGATG
CGCTACGTCG CCACGAACCC CCAGCGCCGC CTCCAGCGGT GGGCATACAC CCGTCCGCAG
GGCCGCCCCC GGGTGCTGAT CACCTCCGGG ACGCACCATC GCATGCTCGC CGGCCACTCG
TTGCGACGCC TGGCAGAGCA GCTCACCGCT GTGGACGCCG AGGTGGTGAT CGCGGCACCC
ACTCGGGTCG CTGAGGAGTT CGGCTCTACG GCGGACGACA TTCGTATCGG CTGGGTCCCG
TTGGACACCG TGGCTCCCAC TTGTGACCTG GCTGTTCACC ACGGCGGCGC CACCACCACG
ATGGCCATCA TCGCCGCGGG CGTACCGCAG GTGATCACTC CCCCGAACAC TCACACCAGG
GCGATCGCCG ACGCCCTGTC CGACTTCGGC GCCGCAGCGA CGATCCGCGC TTCCGACCAG
GCCGATCACG AACTGCCGGA CGTGCTGGCC ACGAGCAGCC GGGAGCTACT CGCCGACTCC
CGGTACACCC GGCAGGCGCA GGCCCTCGCC GCCGAGTTGG CCACGCTTCC GACCCCAGCG
GACATCGTCC GGACAATGGA GACGCTGGCC TGCACTCGGC GAGAATGCCG ACAGTCCGAA
TGA
 
Protein sequence
MRFLFLTTGS HVTVYAIAAL AHAVRNAGHD VLVATNEPLI DAVETVGLPG VSITSESIRH 
FLATVDSADE MVVTGRGLGR MASATLVRLG ELAQDWAPDV IVGSSMSYAA GLLAATQGIP
FVRHIEYLQI PMAEIDPVAE EELTPELTRR GLGGLPEPDL LIDVSPPSLR SPPAAGVHPM
RYVATNPQRR LQRWAYTRPQ GRPRVLITSG THHRMLAGHS LRRLAEQLTA VDAEVVIAAP
TRVAEEFGST ADDIRIGWVP LDTVAPTCDL AVHHGGATTT MAIIAAGVPQ VITPPNTHTR
AIADALSDFG AAATIRASDQ ADHELPDVLA TSSRELLADS RYTRQAQALA AELATLPTPA
DIVRTMETLA CTRRECRQSE