Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1840 |
Symbol | |
ID | 5058299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2107909 |
End bp | 2108577 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640474110 |
Product | glycosyltransferase family 28 protein |
Protein accession | YP_001158680 |
Protein GI | 145594383 |
COG category | [S] Function unknown |
COG ID | [COG5017] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATTCGG TGAGTACGAG GCGAGTCGAG GCGCCGGTGG AGTCCGAGTC CAGCCGTCGG GTTCCCCGGC AACGGAACCG GTCTCGTGCC GATCTGGCGC GGGTTTTGGT TGCGGTCGGC ACCGACAAGC ACCCGTTTGA CCGGCTGATT GACTGGCTGC GGGATTGGCA GTCGACAGCC CCCGATCGCG TGGTTCTGAC CATCCAACAT GGTCATACCA GAGTGGCCGA TGGTCGCGGC GCAGTGGCCT TCCTGGGGCA CGACGAGCTC CAGGCGGCGA TGTCCGCGGC CGACCTTGTG GTCTGTCACG GTGGCCCGGC CACCATTCTG GAGGCCCGTC GGCGCGGCAC GGTACCGATC GTGGTTCCCC GGGATCCGAC TCACGGCGAA CACGTTGACG ACCACCAACT GCGGTTCGCG CGTCGGCTCG GTGCGGCGGG CCTGGTGGTG GTGTGCGAGA CCCGAGCGAC GTTCGTGGCG GCGCTCACCG CCGGTCTGGC CGAGCCGTCC CGGTTCGTCG TCCGGGCTGA CCCTGAGGCG GCCCGGGCCC GGGAGGCCGC CGTGGCCCGG GTCGGGGAGA TTGTGGAGAA CCTGGTGGTC GCGGCGGACG GCCGACGGGC ATGGTGGCGG CCGTGGTCAC GGTCGCCACG GAGCGGAGCA CGAGGATGA
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Protein sequence | MDSVSTRRVE APVESESSRR VPRQRNRSRA DLARVLVAVG TDKHPFDRLI DWLRDWQSTA PDRVVLTIQH GHTRVADGRG AVAFLGHDEL QAAMSAADLV VCHGGPATIL EARRRGTVPI VVPRDPTHGE HVDDHQLRFA RRLGAAGLVV VCETRATFVA ALTAGLAEPS RFVVRADPEA ARAREAAVAR VGEIVENLVV AADGRRAWWR PWSRSPRSGA RG
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