| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1771 |
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| Symbol | |
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| ID | 5058230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2027666 |
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| End bp | 2028868 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640474042 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001158612 |
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| Protein GI | 145594315 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGAGCT ATCTCGGGAC GATCATCGCC GCGCTTGCCG CCGCGGCGGG CGCCCTGTTC
GTGGTCGGCG TCGCGCACCG GATAACCCGG CGGCTCGGTC AGCGTTCACT GCTGTTGACC
GGGCTGGCCC AGCACGCACA CCGCGCCTTC CAGGTGGCGG CGACCATCCT CGCCGTGCAG
TTCGCCGTGC GGTTCACCAC CGGCTACGCG ACCGGTACCG GCTGGCGCCA GGCCCTACTG
CACATCCTGG TTCTCGGTGT GATCGCCGCC ACCGCCTGGC TGGTCGCCGC GTTGCTGGTG
GTGGTCGAGG ACACCGCGCT CGCCCGGTTC CAGGTCGAGG TGGCGGACAA CCGGCACCGC
CGGATCCGCA CCCAGGTGGT GCTACTGCGT CGGTTGACCA TCGCGGTGGT CATCATCCTG
GCGCTCGGCG TGATGCTGAT GACCTTCCCT GCCGTTCGCG GGATCGGCGC TGGGGTGCTG
ACCAGTGCTG GTGTGGTCGG TGTGGTGGCG GCGCTGGCCG CGCAGAGTCT GCTGGGTAAC
GTCTTCGCCG GCCTCCAGCT CGCCTTCAGC GACGCCGTAC GCCTCGGCGA CGTGGTGGTC
GTGGACGGAG AGTGGGGTCG GATCGAGGAG CTGACCCTCA GCTACGTGGT GTTGCGAATC
TGGGACGACC GGCGGTTGAT CCTGCCCACG TCGTACTTCA CCAGCAAGCC GTTCCAGAAC
TGGACCCGGA CCGAGGCCGC GGTGCTCGGT ACCGCCGAGT TCGACGTCGA CTGGTCGATC
TCGGTGCAGG CGATGCGGGA GGAGCTACGT CGCCTGGTGG AGAACAGCGA ACTGTGGGAC
GGCCGAGTCT GCGTGTTGCA GGTGATCGAC GCCACCGGCG GCATGATCAA AGTGCGCGCG
TTGGTCAGCG CGGAGAACGC CGGCAGCCTC TGGGATCTGC GCTGCCTGGT CCGCGAGCAC
CTGGTCGCCT GGGTGTGGGA GCAGCGGCCG ACCGCGATGC CCCGCACGCG GGCCGAGGTC
GGTGATGCCG GGGGCGGCCA GCCGTGGCAG TGGGTCCCGC CCCGCCACCG GCCCCAGACA
GCGGGCGGCC TCGCCGACGG TGCGGGGTCC GACGATGCGC GGATCTTCGG CGGCAGCGAG
GACGGCGCGG CCCGCAGCGA GGCCTTCGTT GGCCCGGACG AGCCGGCTGA CTCCCGCCGC
TAA
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| Protein sequence | MQSYLGTIIA ALAAAAGALF VVGVAHRITR RLGQRSLLLT GLAQHAHRAF QVAATILAVQ
FAVRFTTGYA TGTGWRQALL HILVLGVIAA TAWLVAALLV VVEDTALARF QVEVADNRHR
RIRTQVVLLR RLTIAVVIIL ALGVMLMTFP AVRGIGAGVL TSAGVVGVVA ALAAQSLLGN
VFAGLQLAFS DAVRLGDVVV VDGEWGRIEE LTLSYVVLRI WDDRRLILPT SYFTSKPFQN
WTRTEAAVLG TAEFDVDWSI SVQAMREELR RLVENSELWD GRVCVLQVID ATGGMIKVRA
LVSAENAGSL WDLRCLVREH LVAWVWEQRP TAMPRTRAEV GDAGGGQPWQ WVPPRHRPQT
AGGLADGAGS DDARIFGGSE DGAARSEAFV GPDEPADSRR
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