| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1557 |
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| Symbol | |
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| ID | 5058010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1769350 |
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| End bp | 1770636 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640473825 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001158401 |
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| Protein GI | 145594104 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.920193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCA CCACGCGGCG TTCCCGCCTG GCGGTCAGCG CCCTTGCCGC GATCACCGCC
GTCGGCGGCC TCGCGGCCTG CGGCAACGAC GACGAACCGG CCGCCGGCGA GAAGCCCAGC
AAGCTGGTCG TCGAAACGTT CGGCGAGTTC GGCTACGACG AACTCATCAA GCAGTACGAG
AAGGACACCG GCATCAAGAT CGAGCTGCGC AAGACCGCGC AGCTGGGCGA GTATCGACCC
AAGCTGGTGC GCTACCTGGC CACCGGCAAG GGCGCGGGCG ACGTGGTCGC GCTGGAGGAG
GGCATCCTCA ACGAGTTCAA GTCCAATCCG CGCAACTGGG TGGATCTCGC TCCGCTGGTT
GACGACCACT CCGAGGACTA CCTGCCCTGG AAGTGGGAGC TGGGCAAGGC GCCGGACGGC
CGACTGATGG GTCTGCCGAC CGACGTCGGC AGCCTCGCCG TCTGCTACCG CAAGGACCTC
TTCGAGGCGG CTGGCCTGCC CACCGAGCGG GACGAGGTCT CGGCGCTCTG GCCGGACTGG
GACAGCTTCC TGGCGACCGG CCGCGCATAC AAGGATGGCA GCGGCGGCAA GGCCCTCATC
GACTCGATCA CCGCCGTCTC CGACGCGGCG CTGTTCCAGC AGGGCGACGA CCTCTTCTAC
GACAAGGAGA ACAACATCAT CGCGGACAGC AGCCCCGCGG TGAAGGCGGC CTGGGACACC
GCGATCTCGA TGGTCGATAT CTCCGCCAAG GCTGCCACCT GGTCACCGGA GTGGTCCGCC
GGCTTCAAAC AGGGCAGTTT CGCCGCCACC TTCTGCCCCT CCTGGATGCT CGGGATCGTC
GTGGAGAACT CCGGCGAAGA GAACAGGGGC AAGTGGGACG TGGCGGCGGT GCCCGGTGGC
GGCGGCAACT GGGGTGGCTC CTGGCTGGCC GTGCCGGAGC AGAGCTCCTA CCACGAGGAG
GCGGCGAAGC TCGCCGAGTT CCTGACCAGC GCCACCAGCC AGGTGGAGGC ATTCAAGGCC
AAGGGTCCGC TCCCCACCCA CCTGGAGGCG TTGCAGGACG AAACCTTCCT CAGCTACACC
AACGAGTACT TCAGCGACGC CCCGACCGGC AAGATCTTCG GCGAGAGCGT CAGCAAGATC
GAGCCGATCC ACCTGGGGCC GAAGCACCAG GCGGTGAAGG AGAACGCCTT CGGGCTGGCC
CTGCGGGCGT TCGAGAACGG ACAGGCCAGT GAGGACGAGG CCTGGCAGCA GTTCACCAAG
GACGCCGAGA TCCAGGGCGC CTTCTGA
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| Protein sequence | MSLTTRRSRL AVSALAAITA VGGLAACGND DEPAAGEKPS KLVVETFGEF GYDELIKQYE
KDTGIKIELR KTAQLGEYRP KLVRYLATGK GAGDVVALEE GILNEFKSNP RNWVDLAPLV
DDHSEDYLPW KWELGKAPDG RLMGLPTDVG SLAVCYRKDL FEAAGLPTER DEVSALWPDW
DSFLATGRAY KDGSGGKALI DSITAVSDAA LFQQGDDLFY DKENNIIADS SPAVKAAWDT
AISMVDISAK AATWSPEWSA GFKQGSFAAT FCPSWMLGIV VENSGEENRG KWDVAAVPGG
GGNWGGSWLA VPEQSSYHEE AAKLAEFLTS ATSQVEAFKA KGPLPTHLEA LQDETFLSYT
NEYFSDAPTG KIFGESVSKI EPIHLGPKHQ AVKENAFGLA LRAFENGQAS EDEAWQQFTK
DAEIQGAF
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