Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1553 |
Symbol | |
ID | 5058006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1763836 |
End bp | 1765584 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640473821 |
Product | hypothetical protein |
Protein accession | YP_001158397 |
Protein GI | 145594100 |
COG category | [R] General function prediction only |
COG ID | [COG0433] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.623642 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG ACGCCATGGA CGGCCCGGGC GAGTTGGTCG GCCGGGTGCT CGGCACCGCC GACGCCACCC CGTTGCAGTT CTGGACCGCG GTCTCCCCCA CCAGCTACCT GCAACTCGAC GATGTCGTGG CCACCCGTCG CGAGCTGCCA GATCGGGAGC CGGTGACGAT CGCCGGGGTG GTCACCCAGG TACGTGCCCG GCACGAGGGT GCCCAGTTCG ACTCCGACGT CTTCGCCATC GCCGACGGCA TGCTCCCTGC CCAGATACAG GAGGCCGCCG AGATCACCAC CACCCGGGTC GACCCGGAGC TCTACGTTCC GCCGGCACCG GGCGCGGTCG TGCACCGGGC CGAGGGAGAC GCCCGGGCCC GGGCCCTGCA CTTCGACCGG ATGGAACGAC GGATCCCGAT GGGCACGGGC CGCGACGGCG TGCCGGTCTA CCTCAACGCC GACTTCCTCG ACGGCACCCG GGGCGCGCAC GTCTCCATCT CCGGCATCTC CGGCGTCGCC ACCAAGACGA GCTTCGCCAC CTTCCTGCTC TACTCGGTAT TCCGCTCCGG CGTCCTGGGC GGTGACGCGG TCAACGCCAA GGCGCTGATC TTCAACGTCA AGGGAGAGGA CCTCCTCTTC CTCGACCACC CCAACACCCG GCTGGACGAG TCCACCCGCG CGGCGTACGC GCGGCTCGGC CTGGACGCCG CGGCCTTCCC CGACGTGCGG GTCCACGCTC CGCCCCGGGC CGGTGACGCC ACCGGCACAC CGGACGTGAG CAGCCGGCTC AGCGGGGTGG ACAGCTTCTA CTGGACGCTG GACGAGTTCT GCGCCGACCG CCTCCTGCCG TACGTCTTCG CCGACGCCGA CGACGAGCGC CAGCAGTACA CGATGGTGGT GCACTCGGTC ACCGCCCACC TGGCCCGCTA CGCGCAGCCC GCCGACGGCG GGGTGAGCAT CGACGGGGTG CGCCTCGGCA GCTATGCCGA CCTGGTCGAT CACGTCGTCG AGCAGCTCAA CGACGACGAG ACCCGGGGCG ACTGGGCCGG CAGCGCGGTC GGCCTCGGCA CCGTCAACGC CTTCGCCCGC CGGTTGATCG GCAGTAAGAA GGACCTGTCC CGGCTGATCC GCGGCGATCT GGCCACCCGG CGTCCGCACC GCATCAACAC CGCGGAGTCG GCTCAGGTCA CCGTGGTTGA CCTGCACAAC CTGCCAGACC GGGCGCAGCG GTTCGTGGTC GGCGTGACGC TCAGAAGCGA GTTCGAACGC AAGGAGAAGA CCGGCACGGC CAAGCCGCTG CTCTTCGTCG TCCTCGACGA GCTGAACAAG TACGCCCCCC GCGAGGGCTC CTCCCCGATC AAGGAGGTGC TGCTGGACAT CGCCGAGCGG GGCCGCTCCC TCGGGGTGAT CCTGGTTGGC GCGCAGCAGA CCGCCAGCGA GGTGGAACGG CGCATCGTCA CGAACTCGGC GGTCCGGGTG GTCGGCCGGC TCGACCCGGC CGAGGCGTCG CGCCCCGAGT ACGGCTTCCT CCCGCCGGCG CAACGGCAGC GGGCGCTGCT CGCCAAACCG GGCACGATGT TCGTCAACCA ACCCGACATC CCGGTGCCCC TCTGCCTGGA GTTTCCGTTT CCCGCGTGGG CGACGCGGGT CGCGGAAGCG GGCACGGCGC CCTCCCAGAC GCTCCGGTCG ATCACTCAGT CGGCCGATCC GTTCGCCGTG GTGGGCTCCG GCGGCAGCGA CGACGACATC CCGTTCTGA
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Protein sequence | MTDDAMDGPG ELVGRVLGTA DATPLQFWTA VSPTSYLQLD DVVATRRELP DREPVTIAGV VTQVRARHEG AQFDSDVFAI ADGMLPAQIQ EAAEITTTRV DPELYVPPAP GAVVHRAEGD ARARALHFDR MERRIPMGTG RDGVPVYLNA DFLDGTRGAH VSISGISGVA TKTSFATFLL YSVFRSGVLG GDAVNAKALI FNVKGEDLLF LDHPNTRLDE STRAAYARLG LDAAAFPDVR VHAPPRAGDA TGTPDVSSRL SGVDSFYWTL DEFCADRLLP YVFADADDER QQYTMVVHSV TAHLARYAQP ADGGVSIDGV RLGSYADLVD HVVEQLNDDE TRGDWAGSAV GLGTVNAFAR RLIGSKKDLS RLIRGDLATR RPHRINTAES AQVTVVDLHN LPDRAQRFVV GVTLRSEFER KEKTGTAKPL LFVVLDELNK YAPREGSSPI KEVLLDIAER GRSLGVILVG AQQTASEVER RIVTNSAVRV VGRLDPAEAS RPEYGFLPPA QRQRALLAKP GTMFVNQPDI PVPLCLEFPF PAWATRVAEA GTAPSQTLRS ITQSADPFAV VGSGGSDDDI PF
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