| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1191 |
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| Symbol | |
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| ID | 5057641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1339260 |
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| End bp | 1343456 |
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| Gene Length | 4197 bp |
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| Protein Length | 1398 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473460 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001158039 |
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| Protein GI | 145593742 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.143545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGTCA TGATTTCCGC CGTCGAGTCC ACCGACTTGT TCGTCGGCAC CGAGGACAAC
CCGCGTCAGG TGCTCCGTGT GACGCTTGAC GGCCCGCCCG GGCCGGTCAC CGTCACCGGG
CCGGGTGTCT CCGGTAACGC GACCGGCACG GGCGTCGTCG AGGTCCCCCT GGACATCGAC
GACCGAACCC CCGGCACGCA GGTGCCGGTA ACCGTCACGG CCGGCGACGC GACTGCGCAA
GCCACTGTCG TCGTCGCCGA GCCGGGCTGG ACGATGTTCC TCGTCTCACA CTTCCACTAC
GACCCGGTGT GGTGGAACAC GCAGGCCGCG TACACCTCGC CGTGGGAGCT GCTCTCCGGC
GACGCCACCA CCCGGCCGCT CTGGGAGCGC AACGGCTTCG CGCTGGTGGA CGCGCACATG
GACCTCGCCC TACGGGACCC GGTCTACACG TTCGTCCTCG CCGAGATCGA CTACCTGAAG
CCGTACTTTG ATCTGCATCC CGAACGCCGG GCGGACCTGC GCCTGCTGAT CGAGCGCGGC
CAGGTTGAGC TGATCGGCGG CACCTACAAC GAACCCAACA CCAACCTCAC CGGTGCCGAG
ACCACCATCC GCAACATCAT CTACGGTGTC GGCTACCAGC GGGACATCCT CGGCGGGGAC
CCGCAGACGG CCTGGCAGCT GGACGTGTTC GGGCATGACC CGCAGTTCCC GGGCTACCTC
GCCGACGCCG GACTGACCGG TTCGGCCTGG GCCCGCGGCC CGTTCCACCA GTGGGGGCCG
ATCCAGAAGA ACTTCCGCGA GGCCAAGAAC GACGCGACGG TCATGCAGTT CCCGAGCGAG
TTCGAATGGA TCTCGCCGTC GGGTCTCGGT GTCCTCACCC ACTTCATGCC GCACCACTAC
TCGGCCGGCT GGTGGATGGA CTCCTCGCCT GACCTGGCCA GTGCCGAGAA GGCCGTCTAC
GAGCTGTACC AGCGCCTCAA GCCGGTCGGC GCGACGAAGA ACCTGCTGCT GCCGGTCGGC
ACCGACTACA CCCCGCCGAA CAAGTGGGTC ACCGAGATCC ACCGTTCGTG GGCCGAGAAG
TACGTCTGGC CCCGCTTCGT CTGCGGTAAC CCGCGGGACT TCCTCGACGC CGTCCGCGCG
GAGCTGGCCG CGACCGGACG CCGTCCCAGC CCACAGACGC GGGACATGAA CCCGATCTAC
ACGGGCAAGG ACGTCTCCTA CATCGACACG AAGCAGGCGC AGCGGGCCGG CGAGGTCGCC
GCCGTGGACG CGGAGAAGCT GGCGACGCTG GCCGCGCTGG AAGGGCTCGG CCGCTACCCC
GACGCCGCAC TCGACAAGGT CTGGCGGCAG CTCGCCTACG GTGCCCACCA CGACGCGATC
ACCGGATCGG AGTCCGACCA GGTCTACATC GACCTGCTCT CCGGCTGGCG TGAGGCGTAC
GACCTGGCGG CCGCCGTCCG GGACCGGGCG CTGGACGTGC TCGTCGGGAC AGTTGACACC
ACCGGCGACG GAACACCGAT CGTCGTCGCG AACACGCTCT CCTTCGTCCG CTCCGACCTG
GTGTCGGTAC GGCTTCCCGA GGGCCACGAC GGTGGCCGGC TGATCGACGA CACCGGTGCC
GAGGTGCCGG CCGTCGTCGA TCGGGGAACG CTGCGGTTCC ACGCCGCCGA TGTCCCCGCC
CTGGGGTGGC GGACCTGGCG GCTGCTGCCG GGCGTCTCCA GCGTGGAGCC GGCCTGGACG
CCCGCCGACG GTGCCGCGAT CGAGAACGCC TACTACCGGG TCACCGCCGA CGCCGAGCGC
GGTGGCGGAC TCGACAGCGT CTACGACAAG ATCTCGAACC GGGAGTTGAT CCGCGCCGAC
CACCTCGGTA ACGAGCTGCG GATCTACGAG GAGTACCCGG CCCACCCCGA CTTCGGCGAG
GGCCCGTGGC ACCTGATCCC GAAGGGGCCG GTCGTCGGTA GCGCGGCGGC GGGGGCGACG
GTCCGCGTCG AGACCAGCCC GATCGGTTCC CGCCTGGTCG TCACCGGCGT CGTGGACGAG
ATCGGCTACG AGCAGACAAT CACGCTGTGG CACGGGGTGC GCCGCGTGGA CTGCCGTACC
CGCATCGTCG ACTTCGCCGG CGCTGACCGG CTGGTTCGGG TGCGGTTCCC GGTCGACCTG
CCCGGCGCAC TGCCGGTCTC CGAGGTTGCC GCCGCGGTGG TCGGCCGTGG GTTCGCGTTG
CCGGACGTGG ATGCCGCGGA AGCACCCTGG ACGCTGGACA ACCCGGCCAA CACCTGGTTC
GGGCTCGGCT CCACGGCGCG GGTCTCGCTC TCCGACGCCG CCGGTTCCCC GCTGGGTGAC
CGTGCCCTCG GCGTCGCCGA GGTGGTCACG CCCACGCTCG ACGAGGCGGC CGACGCTCGT
GACCTGGTCG TCGCGCTGGC CGCGGTCGGT GTCACCGTGA CGACCGCCAG CGCCGACTGG
GCGCGGTACG GCTGGCTCGA TGTGGACTCG AACCTGCCCG ACTTCCGCAT TGTCATCGGA
GGGCCGCAGA CCAACGACGC CACCCGGGAG CTGTTGGAGC GGGCCGGCCC GGAGTATGTC
GAGGCGCTGG ACCAGCACGG CCGGGTCTGG ATTCCCGCGG AGAAGGCGCT GCACGAGGTG
TGGCAGCCCA ACGCCGACCT ACGGGACCTG CGGGCGCTGC CGGCGCTTGT GGTCACCGAC
GTCGCCGCGC TCACCGAGGA CGTCGCCGAC GCCCAGATCC AGGCCTGCTG CCCGGGTGCG
GTTCCGACCT CGGAGCTGCT GGTCGACCAC ACCGTCGCGA TGCTCACCTA CGGGCTGCCC
GGTTTCGCCA TCGACCCGAC CGGAGCGCTG CACCTGTCGC TGATGCGTTC GTGCACCGGC
TGGCCGTCCG GAGTGTGGAT CGACCCGCCG CAGCGGACCC TGCCCGACGG CGCGTCGTTC
CAGCTACAGC ACTGGACCCA TGAGTTCAAC TACGCGGTGA CCAGTGGCGA CGGCGACTGG
CGGGCGCTCA CGCTGCCCGC GCAGGGCCAG GAGTACAACC ACCCGCTGTA CGGCCGGGTC
GTCGAGAACC ACCCGGGGAC GAAGCCGGCG ACGCACTCGT ACCTGGGGGT GGAGCCCGCC
CGGGAGGTGC TGCTCGGGAC GCTCAAGCCC ACCGGCAACC CGATCGCGCA CGGCGCCGCC
GTCTCCTCGG ACCCGGCGGA CGCGGTCAGT CTGCGGCTGC TCGAGTCAAC CGGGCTCGGC
CGCTCCGCGA CCCTGACCGG TGCGCTGGCC CTGACCGAGA AGCACCAGGC CGACCTGCTG
GAACGTCGTG GCGCGGCGCT CGCGGACTCG ATCGAGTTGA CGGGTTCGCA GGTCACCACG
GTCGTCGGCG TTCCGGCAGC GGCCCCGCGC AGCGAGGAGC CGCTCGGGCC CGAGGTCGAG
ATCGCGCAGC CGGTGCACTC CCGATACTGG CTGCACAACC GGGGCCCGGC GCCGATGGGC
TACCTGCCGG TTTCCGTGGG TGTCTCCCCG GGGCTGCTGC GGACCGTCGG CGAGCCGGTC
GAGGTCTCCG TGGTGCTCGC CTCGCACCTG AGGGACGCGG CCGTCGAGGG GACCGTCAGC
ATCCTCGTAC CGCAGGGGTG GACGACCTCG CTGGGCAGCC GCCCCTACCG GCTCGACCCC
GACGGTCAGC TTCGCTTCGA CGTCACCGTG ACGCCCTCGG TCGGGGTGGA GTCCGGGCTG
TACTTCATCA CGGCGCGGAC CGAGCACCTT GGGCAGACCA TCGAGGATGT CACCACGGTC
GCGGTCGGCG AGCTTCCCGC TCTGCTGCCG GTGCCCGGGG ACATTCCGGA GGACTGGGAC
GCGGCGCAGG GCACGAAGGC CGAGACGGGA CGTGACACCG GGCTGACGGT GGATGTCACC
ACCACCTCGG TCACCGTCGC CCCCGGCGGG CGGGCCACGA TCGGGGTGCG TCTGCACAAC
CGCACTCGCG GAGAGATCCG GGCCGAACTC CAGCTCGTCT CGCCCTGGGG CACCTGGGAC
GCCATCGCCG AGCCGATCCG CGGCGTCGCG TTGCCCGCGG GCGAGTCGGA CACGGTCACC
TTCGACGTCG TTCCCCCGCG GGACGCCGAT CCGGGCCGGT TCTGGGCGCT GGTGAAGGTG
ATGTGGTTCG GCCGCTGCCA GTACGCCCCC ACCGTTGAAC TGGTGCTGGA GCCATGA
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| Protein sequence | MSVMISAVES TDLFVGTEDN PRQVLRVTLD GPPGPVTVTG PGVSGNATGT GVVEVPLDID
DRTPGTQVPV TVTAGDATAQ ATVVVAEPGW TMFLVSHFHY DPVWWNTQAA YTSPWELLSG
DATTRPLWER NGFALVDAHM DLALRDPVYT FVLAEIDYLK PYFDLHPERR ADLRLLIERG
QVELIGGTYN EPNTNLTGAE TTIRNIIYGV GYQRDILGGD PQTAWQLDVF GHDPQFPGYL
ADAGLTGSAW ARGPFHQWGP IQKNFREAKN DATVMQFPSE FEWISPSGLG VLTHFMPHHY
SAGWWMDSSP DLASAEKAVY ELYQRLKPVG ATKNLLLPVG TDYTPPNKWV TEIHRSWAEK
YVWPRFVCGN PRDFLDAVRA ELAATGRRPS PQTRDMNPIY TGKDVSYIDT KQAQRAGEVA
AVDAEKLATL AALEGLGRYP DAALDKVWRQ LAYGAHHDAI TGSESDQVYI DLLSGWREAY
DLAAAVRDRA LDVLVGTVDT TGDGTPIVVA NTLSFVRSDL VSVRLPEGHD GGRLIDDTGA
EVPAVVDRGT LRFHAADVPA LGWRTWRLLP GVSSVEPAWT PADGAAIENA YYRVTADAER
GGGLDSVYDK ISNRELIRAD HLGNELRIYE EYPAHPDFGE GPWHLIPKGP VVGSAAAGAT
VRVETSPIGS RLVVTGVVDE IGYEQTITLW HGVRRVDCRT RIVDFAGADR LVRVRFPVDL
PGALPVSEVA AAVVGRGFAL PDVDAAEAPW TLDNPANTWF GLGSTARVSL SDAAGSPLGD
RALGVAEVVT PTLDEAADAR DLVVALAAVG VTVTTASADW ARYGWLDVDS NLPDFRIVIG
GPQTNDATRE LLERAGPEYV EALDQHGRVW IPAEKALHEV WQPNADLRDL RALPALVVTD
VAALTEDVAD AQIQACCPGA VPTSELLVDH TVAMLTYGLP GFAIDPTGAL HLSLMRSCTG
WPSGVWIDPP QRTLPDGASF QLQHWTHEFN YAVTSGDGDW RALTLPAQGQ EYNHPLYGRV
VENHPGTKPA THSYLGVEPA REVLLGTLKP TGNPIAHGAA VSSDPADAVS LRLLESTGLG
RSATLTGALA LTEKHQADLL ERRGAALADS IELTGSQVTT VVGVPAAAPR SEEPLGPEVE
IAQPVHSRYW LHNRGPAPMG YLPVSVGVSP GLLRTVGEPV EVSVVLASHL RDAAVEGTVS
ILVPQGWTTS LGSRPYRLDP DGQLRFDVTV TPSVGVESGL YFITARTEHL GQTIEDVTTV
AVGELPALLP VPGDIPEDWD AAQGTKAETG RDTGLTVDVT TTSVTVAPGG RATIGVRLHN
RTRGEIRAEL QLVSPWGTWD AIAEPIRGVA LPAGESDTVT FDVVPPRDAD PGRFWALVKV
MWFGRCQYAP TVELVLEP
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