Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1053 |
Symbol | |
ID | 5057500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1191864 |
End bp | 1194710 |
Gene Length | 2847 bp |
Protein Length | 948 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640473322 |
Product | LamG domain-containing protein |
Protein accession | YP_001157904 |
Protein GI | 145593607 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCGGT TGCATGCTGG GCGACGGTCT GTCGGTTGGG CTGTTGTGTC GGCGTTGGCG GTCGGTGGGT TGGCGGTGCC AGCGTCGTCG GCGTCAGCGG CAGTCGCGTG TGTGGGCGAG GTGGCGACCG TCGAGGATGC GATGACGACG GCCGAGGCCT GTGACGCACA GGTCGAGGTG GGCTCGATGC GGTCGGAGAC GTTGGTGGCC TATGCGAATC CGGATGAGAC GATGACGGCG GTGATGTCAC CGGTTCCGGT TCGGACGCTG AAGGGGTCCG AGTGGGTCGA TATCGACCCG ACTCTGGAGC GTAACGGCGA TGGTACGGTG TCGCCGGCGG CCACGACTCA GGATTTGACT TTGTCCGGTG GTGGTTCAGG CCCGCTGTTG ACGTTGGCTG ATTCTGGCCG AAAGGTTTCC CTGACCTGGC CAGCGGGTTT GCCGGCGCCT GTATTGACTG GCGATCTCGC GACCTATTCG GAGGTATTTC CGGGTGTGGA TCTGCAGGTT CGTGTGGGTG ACAGTTGGTA TCAGCAGTTG TTTGTGGTGA AGTCGGCGCA GGCGGCGGCG AATCCGGCGT TGGCCGCGTT GTCGTTCAAC GTGACGACGG AGGGTGTGAC GCTACGGGAG CAGTCGGATG GGGCGATCGA GGCCGTTGAT GCCGAGGGCG AGGTGGTGTT CGCGGCCTCG GCGCCGTCGA TGTGGGCATC TCCCGACCCG TCGGCGATGG AAGCGGCTGT TCGGTCGGGG GAGTGGTCGC GGCCGGCGTT GCAGGCGATG GTTGGCGAGG GTGCTGTCGA TGAGCCGGCT GAGCCGCATC GGGTGCGGAT GGAGGCGGAG GTTTCCCAAT CGCAGCTGAC GGTGATTCCG GTGCCCGAGT TGCTGCGGTC GCCGGACACG GTCTACCCGG TGTATATCGA TCCGAATTTC GCCTATCCGT CACCGACGTA CTGGACGAAC GTGATGGACG ACAATCCGAA TCACTCGTAT TTTAACGAGC ATGACGAGTT GAAAGTCGGC CGGCAGTGGA AAACCTCGAA TGTCTGGCGC ACGCACATGC AGTTCCACAA TTTTGGGGTG ATGTCCGGGT CGAAGATCGT GTCGGCGGAG CTAAAGGTTA CCGCGGATCA TACAGCGGAT TGCGACGGCA CGGACATTCA GTTGTGGGAG ACGGAGCACA TCACTCACTT CTACCAGTAC ACGTGGAATA CCGCGGCCAA CGGCTGGTTA AAATATCTGG ACACCAAGCA TTTTGATGCG AATGAGGCGT CGTGTCCCAA GGACGACGAC CAGGAGGTGT TCAACGGGGC GCTGCAGGCG GCGGTGCAGA CTAGGGTAAG TGCCGGCGTC AGCGCGATGA CGTTCGGTAT GCGGGCTGCC AGTGAGTCTG ATTACTACCA GTGGACGAAT TTCCTGCCTA ATAAGACCGC GTTGATCGTG CAATATGACA GGGTGCCGAT GAAGCCGGTT GGTCTGTCGT TCACGACGAC ATCGGACTGC TATTTGCAGT GTTCGTCTCC GGCGATGGTG CGGAATGCAA CGCCGACGTT GCGGGCGCGG GTGCAGGACG CGGACGGCGG CGTGTTGCAG ACGGCGTTCG AGATTCGAAC GGCGGCGAGC CTGTCGGCGC CGATCGTGGT GGAGAGCACG ACGATGCCGC GGTCGTTCGT GACGACGTCG GGTAACGCGA CGGCGACCGC GACATCCCAG GTTCCGGCGG GTAAGTTGAC CTCTGGGACC ACCTACTACT GGCACGCCAC AACGAAGGAC GAGCTGGGGT TTTGGAGTGG CTGGGGCTCG TGGTACAGCT TCACGGTCGA TACGTCTCCA CCTGGGGTGT CGTCTGTCAC GTCCAGTGAG TTCCCCGGTC GGCAGTGGGG CGCTGAGGTG GGTACGGCGG GGACGTTCAC GCTGAGCGCC GCCTCGGATG CGGCGGAGTT CAGCTGGCAG GTGGACGCGG GCCCGGTGAC GACGGTAGCG GCGACGGGCG GTGATCCGGC CACGGCGACG ACCGGTTCAT ACACGCCGGC TACGGATATG GTCCACACGT TGTACGCGAA GGCCAAGGAC GTGGCGGGTA ACGTCGGTCC GACTGTCGGG CATCAGTTCT GGGTGACGCC GCTTGCGAAC CGGTGTTGGA ACTGGCGGTT GGACGAGACG TCCGGGTTGA CCGCGAAGGA CTGGGGTAAC CAGGACTCCG CTGACGTGGT GTGTCCGCCG ATCGGGTCGT CCGTGACGGC GATGCCGGGC GCTGTCTCGT CGGGGGTGAC GTGGACTGCG GATGCGGAGC GGGGACAGGT GGCCAGCTTC GATGGTACGG GTGAGATCGC CACGCCAGGT GCGGTGCTCG ACACGACGAA GGCGTTCACG GTGACCGCGT GGGTGAAGCT GACGGACCTG GCGTCGGGGA GTGTGCAGAC GGTTGTTTCG CAGGCCGGAG ACGCTGTCAG TGATCTGAGC CTGGAGTACC GGCAGGACGC GAATGGCGGC GCGGGTGGGT TCTGCTTCAC GATGGCCGCG GGTGACGGTG AGTTGACGAC GGCTTGTGCG GATCCGGTGT CGTGGCCGGT CAGTGAGAAC CAGTGGGTGC ACCTGGCCGG CGTCTATGCC CCGACGCTGG ACGCGATCCG GGTGCATGTG ATGGGAGATC CCCAGTTTTG CGCGGGTGAC TTCGGTGAGG CACCTTTCAC ATCGCCTCGG CCTGCCAACG GAGCATTCCT GATTGGTCGC GGGACGCAGG GTGCTGATGA CAGCCCTGCT CACCAGCTCG TTGGTCGTGT ATCCGATGTG TATGGATTTC AGCGTGTGCT GAGCAATGAG GAAATCTGTC AGATGAGCTT TTCGTAG
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Protein sequence | MGRLHAGRRS VGWAVVSALA VGGLAVPASS ASAAVACVGE VATVEDAMTT AEACDAQVEV GSMRSETLVA YANPDETMTA VMSPVPVRTL KGSEWVDIDP TLERNGDGTV SPAATTQDLT LSGGGSGPLL TLADSGRKVS LTWPAGLPAP VLTGDLATYS EVFPGVDLQV RVGDSWYQQL FVVKSAQAAA NPALAALSFN VTTEGVTLRE QSDGAIEAVD AEGEVVFAAS APSMWASPDP SAMEAAVRSG EWSRPALQAM VGEGAVDEPA EPHRVRMEAE VSQSQLTVIP VPELLRSPDT VYPVYIDPNF AYPSPTYWTN VMDDNPNHSY FNEHDELKVG RQWKTSNVWR THMQFHNFGV MSGSKIVSAE LKVTADHTAD CDGTDIQLWE TEHITHFYQY TWNTAANGWL KYLDTKHFDA NEASCPKDDD QEVFNGALQA AVQTRVSAGV SAMTFGMRAA SESDYYQWTN FLPNKTALIV QYDRVPMKPV GLSFTTTSDC YLQCSSPAMV RNATPTLRAR VQDADGGVLQ TAFEIRTAAS LSAPIVVEST TMPRSFVTTS GNATATATSQ VPAGKLTSGT TYYWHATTKD ELGFWSGWGS WYSFTVDTSP PGVSSVTSSE FPGRQWGAEV GTAGTFTLSA ASDAAEFSWQ VDAGPVTTVA ATGGDPATAT TGSYTPATDM VHTLYAKAKD VAGNVGPTVG HQFWVTPLAN RCWNWRLDET SGLTAKDWGN QDSADVVCPP IGSSVTAMPG AVSSGVTWTA DAERGQVASF DGTGEIATPG AVLDTTKAFT VTAWVKLTDL ASGSVQTVVS QAGDAVSDLS LEYRQDANGG AGGFCFTMAA GDGELTTACA DPVSWPVSEN QWVHLAGVYA PTLDAIRVHV MGDPQFCAGD FGEAPFTSPR PANGAFLIGR GTQGADDSPA HQLVGRVSDV YGFQRVLSNE EICQMSFS
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