Gene Strop_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0893 
Symbol 
ID5057336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1001268 
End bp1001780 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content66% 
IMG OID640473162 
ProductN-acetylglutamate synthase 
Protein accessionYP_001157748 
Protein GI145593451 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.038377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG CCGGCGGGAT CGTGGTCCGT CGGGCCAGGA CGGCGGACGT TCGGGGGATC 
CGACGGCTGA TCGACACGTA CGCCGACGGC CGGCGGCTAC TCAGTAAGGC GACAGTGACT
CTGTACGAGG ATGTGCAGGA GTTCCGGGTC GCGGTGACAC CCGCCGGAGA CGTGGTTGGC
TGTGGTGCCC TGCACGTCAT GTGGGAGGAC CTGGCCGAGA TTCGGACGGT GGCGGTCGAC
CCGACCTGTC GGGGTGGCAG GATCGGGCAC CGGATCGTGG GTGACCTGAT CGACGTGGCC
CGGGAGTTGG GTGTGGCGCG ACTCTTCGTG CTCACCTTCG AGACTCGCTT CTTCGGTATG
TTCGGGTTCA CCGAGATCGA CGGGGCGCCG GTGCCGTACT CGGTCTACGA ACAGCTGCTG
CGTTCCTACG ACGAGGGTGT CGCGGAGTTT CTCGACCTGG AGCGGGTCAA GCCGAACACG
CTCGGCAACA CCCGAATGCT GCTGCGGCTC TGA
 
Protein sequence
MTAAGGIVVR RARTADVRGI RRLIDTYADG RRLLSKATVT LYEDVQEFRV AVTPAGDVVG 
CGALHVMWED LAEIRTVAVD PTCRGGRIGH RIVGDLIDVA RELGVARLFV LTFETRFFGM
FGFTEIDGAP VPYSVYEQLL RSYDEGVAEF LDLERVKPNT LGNTRMLLRL