Gene Strop_0757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0757 
Symbol 
ID5057199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp839220 
End bp841616 
Gene Length2397 bp 
Protein Length798 aa 
Translation table11 
GC content69% 
IMG OID640473025 
ProductATPase domain-containing protein 
Protein accessionYP_001157612 
Protein GI145593315 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACAGGA CTATGACGCA GAGCTCCAGG GTGCGACCGT GGCGGCTGGC CGACATGCCC 
GTCCGAGTCA AGGCGGCATT GATCGTGTTG CCGACGGCAC TTGCCGCGGT GGTCTCGACC
GGATTCGGGC TCTGGTCCTC GGCTGGCGAG GCGGACGCCA CCCGACATGC CGGGAGGATG
TTCAGCGCGA GCGTCGCGGC TGACGAGCTG ACCCAGCGAT TGCAGGTCGA GCGGATCATC
GCCGTGAGTC TGTTGTTGCC GGAAGCGGAG GTCACCGCCG CGGATTTCGA GCGCGCCGTT
CAGGACACTG ACCGCGCAGC GTCACGGTTT CACCAGCAGC GGGGTCGCCT CGACGAGCTT
CCGTCATCCG TGCAAGCCGT CCTCACCAAT GTGGATGCCG CCTTGACCGA CGTGGGCACA
CAACGGCAGC GGATACGGGG CGAGGGTCCG GTGTCACTGT CGGCGGTGGC CTTCGGCTAC
CAGGGCGTCG TGGCGGACCT GGGCAATCTG CTGCCCACGA TGGCGAGAAG CGGGGCCCCT
CCGCTCCTCG AGGACGCGAT GCGGGTGTCG GCGGCGTTGG CTCGGGCCCG GGAAGCGGTC
GGCCAGCAGC AGGTGATGGT GTTGCAGGCG GTGGCGGCCA ATCAACTGAC GCCGGCGCTG
CACGCTGAGA TTGTCGCCGC GCGAGCGAGT CACGAGGAAG CGCTACGCGA GTTCGACCTC
TCGGCGCGGT CAGGGTGGCG GTCGCTACTG GGGCGGACGA TGACCGGCCC GGATGTGCTG
GCGGCGGTGC GCCTGGATGG AGTGGTGTCG GGCACCGCAC TGTACGAGCC CATGCAGCTG
CCGGGTGGTG CCCAGCAGTG GAGTCGCGTG ATGACTACTC GGGCGAATCT GCTGGCCGAG
GTGCAAACGG TGGTCAACCG CGATATCGCT ACTACCGCTG ACGACTTGTG GATGGAGCAG
GTTCGGGCAG CGGTGCTGCA GGGCATTGTG CTGATAGTGA TGCTCGCCCT CGCCGTGCTC
ACCGCGTTCT GGGTGGCACG ATCGCTGGTA AGCCAGCTCT CTGCCTTGGA GCAGGGTGCG
CGGCGGGTCG CAAACGTGGA GCTGCCGGGG CTGGTGGAGC GGCTGGGGGC GGCATCGGAC
CCGGTAGCAG CACAGCGACT GACTGAGGGC ACTGGAGCGG TCTCCGTGCC GGTCGTCGGC
CGGGACGAGG TGGGCCGGGT AGCGAACGCC TTCAACTTGG TGCTGCGGTC GGCGGTGGAC
GCAACAGCGG ATCAGGCGCG GAGCCGGGTT CTGGTAAGCG CCATGATCAC ATCGATCGGG
CGCCGGGTGC AGGCGTTGAC CGAGCGGCTG CTGGGAAGCA TCGACACACT TGAACGTGAT
GAGGAGGATC CGGACCGGCT GGCCCGGCTC TTCGGCGTGG ACCAGCAGGC GACTCGGCTG
CGACGGTACG GCACGAACTT GTTGATCGTC GCCGGCGGCG GTCCGGGACG ATCGCAGCGT
CAGCCCGTCG AGCTCGTCGA CCTGGTGAAC GCGGCGTTGT CGGAAACCGA GGGCTTCGCA
CGGGTCACGA TGGACCGCTT GGTCGAAGCC GAGATCGACG CCCGGGCGGC GGACGCGGTC
AAGTCGATCC TCGCGGAGCT GCTGGACAAC GCGACCCGGT TCTCTGCGGA GCTGGTGCGG
GTGTCCGCTG GGTGGTCCGG GCGTGACGTG CGGATCCTCG TCGCGGATAC CGGCCTCGGG
CTACCCGCCG TGCAGCTGGA GCGGGCCAAC CAGCTATTGG CGAGCTCGGA GCTGGACGTC
GCGATCACCG ACCAGATGGG CCTGGTCGTG GTCTCCCGCC TGGCGCGGGA GTTCGACATT
TCGACCCGCC TTACCAAAAC TCAGCCAACT GGCATCACCG CAGAGGTGAC TGTCCCGGCG
GAGTACGTGA CCCGCCTGCG CATCCGCGAG TATGTTGTGC CCGGCCTGAC CCGACCGTCC
CCGACAGCGG CGCTGTCGCC GCGGGAGGCG ACGGTTGAGC TGCCGCTTGT GCGTTCCGCG
CAGGGTGCGT TGGCGTTGCC CGCGACGCCG ACGCCGCCGG GGGAACGGGA GGCGGTCGCC
CGGTCTTCCT GGCTGCACCC GGGAGGCGCC GCCGGCAGCG GGCCCCCAAC CGCAGCTGAT
CCGGCCGTGC CGGACACCGG TGAGGCGACC ACTGCTGGCC GTACCGCAGC CGGCTTGCCG
CGGCGTCGCC GGCCGGCGCA GATGGCCGGC GGCTCACCAG CACGGTCCAC CGGCTCGGAA
TCCCCCGAAT CCTCCGAATC GATCGATCCG GAGGCAATCC GAGCACAGGT CGCCGGCACA
ATGCGTGGCC TGCGAGCCGC GTCTGTCACC CCTCCCCTCT CGACAGGAGA ACGCTGA
 
Protein sequence
MDRTMTQSSR VRPWRLADMP VRVKAALIVL PTALAAVVST GFGLWSSAGE ADATRHAGRM 
FSASVAADEL TQRLQVERII AVSLLLPEAE VTAADFERAV QDTDRAASRF HQQRGRLDEL
PSSVQAVLTN VDAALTDVGT QRQRIRGEGP VSLSAVAFGY QGVVADLGNL LPTMARSGAP
PLLEDAMRVS AALARAREAV GQQQVMVLQA VAANQLTPAL HAEIVAARAS HEEALREFDL
SARSGWRSLL GRTMTGPDVL AAVRLDGVVS GTALYEPMQL PGGAQQWSRV MTTRANLLAE
VQTVVNRDIA TTADDLWMEQ VRAAVLQGIV LIVMLALAVL TAFWVARSLV SQLSALEQGA
RRVANVELPG LVERLGAASD PVAAQRLTEG TGAVSVPVVG RDEVGRVANA FNLVLRSAVD
ATADQARSRV LVSAMITSIG RRVQALTERL LGSIDTLERD EEDPDRLARL FGVDQQATRL
RRYGTNLLIV AGGGPGRSQR QPVELVDLVN AALSETEGFA RVTMDRLVEA EIDARAADAV
KSILAELLDN ATRFSAELVR VSAGWSGRDV RILVADTGLG LPAVQLERAN QLLASSELDV
AITDQMGLVV VSRLAREFDI STRLTKTQPT GITAEVTVPA EYVTRLRIRE YVVPGLTRPS
PTAALSPREA TVELPLVRSA QGALALPATP TPPGEREAVA RSSWLHPGGA AGSGPPTAAD
PAVPDTGEAT TAGRTAAGLP RRRRPAQMAG GSPARSTGSE SPESSESIDP EAIRAQVAGT
MRGLRAASVT PPLSTGER