Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0757 |
Symbol | |
ID | 5057199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 839220 |
End bp | 841616 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640473025 |
Product | ATPase domain-containing protein |
Protein accession | YP_001157612 |
Protein GI | 145593315 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACAGGA CTATGACGCA GAGCTCCAGG GTGCGACCGT GGCGGCTGGC CGACATGCCC GTCCGAGTCA AGGCGGCATT GATCGTGTTG CCGACGGCAC TTGCCGCGGT GGTCTCGACC GGATTCGGGC TCTGGTCCTC GGCTGGCGAG GCGGACGCCA CCCGACATGC CGGGAGGATG TTCAGCGCGA GCGTCGCGGC TGACGAGCTG ACCCAGCGAT TGCAGGTCGA GCGGATCATC GCCGTGAGTC TGTTGTTGCC GGAAGCGGAG GTCACCGCCG CGGATTTCGA GCGCGCCGTT CAGGACACTG ACCGCGCAGC GTCACGGTTT CACCAGCAGC GGGGTCGCCT CGACGAGCTT CCGTCATCCG TGCAAGCCGT CCTCACCAAT GTGGATGCCG CCTTGACCGA CGTGGGCACA CAACGGCAGC GGATACGGGG CGAGGGTCCG GTGTCACTGT CGGCGGTGGC CTTCGGCTAC CAGGGCGTCG TGGCGGACCT GGGCAATCTG CTGCCCACGA TGGCGAGAAG CGGGGCCCCT CCGCTCCTCG AGGACGCGAT GCGGGTGTCG GCGGCGTTGG CTCGGGCCCG GGAAGCGGTC GGCCAGCAGC AGGTGATGGT GTTGCAGGCG GTGGCGGCCA ATCAACTGAC GCCGGCGCTG CACGCTGAGA TTGTCGCCGC GCGAGCGAGT CACGAGGAAG CGCTACGCGA GTTCGACCTC TCGGCGCGGT CAGGGTGGCG GTCGCTACTG GGGCGGACGA TGACCGGCCC GGATGTGCTG GCGGCGGTGC GCCTGGATGG AGTGGTGTCG GGCACCGCAC TGTACGAGCC CATGCAGCTG CCGGGTGGTG CCCAGCAGTG GAGTCGCGTG ATGACTACTC GGGCGAATCT GCTGGCCGAG GTGCAAACGG TGGTCAACCG CGATATCGCT ACTACCGCTG ACGACTTGTG GATGGAGCAG GTTCGGGCAG CGGTGCTGCA GGGCATTGTG CTGATAGTGA TGCTCGCCCT CGCCGTGCTC ACCGCGTTCT GGGTGGCACG ATCGCTGGTA AGCCAGCTCT CTGCCTTGGA GCAGGGTGCG CGGCGGGTCG CAAACGTGGA GCTGCCGGGG CTGGTGGAGC GGCTGGGGGC GGCATCGGAC CCGGTAGCAG CACAGCGACT GACTGAGGGC ACTGGAGCGG TCTCCGTGCC GGTCGTCGGC CGGGACGAGG TGGGCCGGGT AGCGAACGCC TTCAACTTGG TGCTGCGGTC GGCGGTGGAC GCAACAGCGG ATCAGGCGCG GAGCCGGGTT CTGGTAAGCG CCATGATCAC ATCGATCGGG CGCCGGGTGC AGGCGTTGAC CGAGCGGCTG CTGGGAAGCA TCGACACACT TGAACGTGAT GAGGAGGATC CGGACCGGCT GGCCCGGCTC TTCGGCGTGG ACCAGCAGGC GACTCGGCTG CGACGGTACG GCACGAACTT GTTGATCGTC GCCGGCGGCG GTCCGGGACG ATCGCAGCGT CAGCCCGTCG AGCTCGTCGA CCTGGTGAAC GCGGCGTTGT CGGAAACCGA GGGCTTCGCA CGGGTCACGA TGGACCGCTT GGTCGAAGCC GAGATCGACG CCCGGGCGGC GGACGCGGTC AAGTCGATCC TCGCGGAGCT GCTGGACAAC GCGACCCGGT TCTCTGCGGA GCTGGTGCGG GTGTCCGCTG GGTGGTCCGG GCGTGACGTG CGGATCCTCG TCGCGGATAC CGGCCTCGGG CTACCCGCCG TGCAGCTGGA GCGGGCCAAC CAGCTATTGG CGAGCTCGGA GCTGGACGTC GCGATCACCG ACCAGATGGG CCTGGTCGTG GTCTCCCGCC TGGCGCGGGA GTTCGACATT TCGACCCGCC TTACCAAAAC TCAGCCAACT GGCATCACCG CAGAGGTGAC TGTCCCGGCG GAGTACGTGA CCCGCCTGCG CATCCGCGAG TATGTTGTGC CCGGCCTGAC CCGACCGTCC CCGACAGCGG CGCTGTCGCC GCGGGAGGCG ACGGTTGAGC TGCCGCTTGT GCGTTCCGCG CAGGGTGCGT TGGCGTTGCC CGCGACGCCG ACGCCGCCGG GGGAACGGGA GGCGGTCGCC CGGTCTTCCT GGCTGCACCC GGGAGGCGCC GCCGGCAGCG GGCCCCCAAC CGCAGCTGAT CCGGCCGTGC CGGACACCGG TGAGGCGACC ACTGCTGGCC GTACCGCAGC CGGCTTGCCG CGGCGTCGCC GGCCGGCGCA GATGGCCGGC GGCTCACCAG CACGGTCCAC CGGCTCGGAA TCCCCCGAAT CCTCCGAATC GATCGATCCG GAGGCAATCC GAGCACAGGT CGCCGGCACA ATGCGTGGCC TGCGAGCCGC GTCTGTCACC CCTCCCCTCT CGACAGGAGA ACGCTGA
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Protein sequence | MDRTMTQSSR VRPWRLADMP VRVKAALIVL PTALAAVVST GFGLWSSAGE ADATRHAGRM FSASVAADEL TQRLQVERII AVSLLLPEAE VTAADFERAV QDTDRAASRF HQQRGRLDEL PSSVQAVLTN VDAALTDVGT QRQRIRGEGP VSLSAVAFGY QGVVADLGNL LPTMARSGAP PLLEDAMRVS AALARAREAV GQQQVMVLQA VAANQLTPAL HAEIVAARAS HEEALREFDL SARSGWRSLL GRTMTGPDVL AAVRLDGVVS GTALYEPMQL PGGAQQWSRV MTTRANLLAE VQTVVNRDIA TTADDLWMEQ VRAAVLQGIV LIVMLALAVL TAFWVARSLV SQLSALEQGA RRVANVELPG LVERLGAASD PVAAQRLTEG TGAVSVPVVG RDEVGRVANA FNLVLRSAVD ATADQARSRV LVSAMITSIG RRVQALTERL LGSIDTLERD EEDPDRLARL FGVDQQATRL RRYGTNLLIV AGGGPGRSQR QPVELVDLVN AALSETEGFA RVTMDRLVEA EIDARAADAV KSILAELLDN ATRFSAELVR VSAGWSGRDV RILVADTGLG LPAVQLERAN QLLASSELDV AITDQMGLVV VSRLAREFDI STRLTKTQPT GITAEVTVPA EYVTRLRIRE YVVPGLTRPS PTAALSPREA TVELPLVRSA QGALALPATP TPPGEREAVA RSSWLHPGGA AGSGPPTAAD PAVPDTGEAT TAGRTAAGLP RRRRPAQMAG GSPARSTGSE SPESSESIDP EAIRAQVAGT MRGLRAASVT PPLSTGER
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