| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0281 |
|---|
| Symbol | |
|---|
| ID | 5056719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 323826 |
|---|
| End bp | 324332 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640472553 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001157144 |
|---|
| Protein GI | 145592847 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG3557] Uncharacterized domain/protein associated with RNAses G and E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0437865 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAGCG ACGTGGTCCG CGTGATCTAC CGCAAGTACG ACGGCAGCGC CCACCGCGAC
TACCCGGCCC GCCGGCTCGC CGAGGATGAC CTCGGCGTCT GGCTCGGTGT GCCGCTCGGC
ACCCCGTCGG TCTACCACGG CCGCCCCTCC GTCGAGCAGA TTCCGTTCGT GCTCCTGGTG
CCGCATCACG GGTGGTGGAC CGGCATGTTC AACCCACCGC CGCGGACCAG CGAGGTCTAC
TGCGACATCG CCAGTCCAGC CCACTGGGAG AACGACGACA CCGTGCACCT CTTTGACCTT
GACCTTGACG TGGTGCGCCG ACGTGGCTCC GGTCTGGTGG AGCTGCTGGA CGAGGACGAG
TTCGCTGAGC ACCGCAAGCG GTTCGGCTAC CCGGACGAGG TGGTTACCGA GGCGCACGCC
GCTGCCCACT GGCTGTTCGC CGCGTTGGGC GACGGCACCG AGCCGTTCGC CACGTCGTAC
CGGAAGTGGC TGGCGCTGGT CGTCTGA
|
|---|
| Protein sequence | MPSDVVRVIY RKYDGSAHRD YPARRLAEDD LGVWLGVPLG TPSVYHGRPS VEQIPFVLLV
PHHGWWTGMF NPPPRTSEVY CDIASPAHWE NDDTVHLFDL DLDVVRRRGS GLVELLDEDE
FAEHRKRFGY PDEVVTEAHA AAHWLFAALG DGTEPFATSY RKWLALVV
|
|---|
| |