Gene Strop_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0102 
Symbol 
ID5056535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp108532 
End bp109299 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content65% 
IMG OID640472369 
Producthypothetical protein 
Protein accessionYP_001156965 
Protein GI145592668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGG CACTTCGGCT GGCCATGAAC GAGGCTGGCC ACACCGCTCA GACGCTCGCC 
GAACGGGTTG GGGTTGACCG GAAAACAACG ACTCGGTGGC TCGTAAAGGA TCATATTCCG
CACCCGGCGC ATCGCACGGC GGCGGCGGAT GCTCTCGGCG TGGACAAGGA GGACATATGG
CCGGACACTT CGAGACGTCG TAATCCGGTG TGGTTCCGCC CGTGGCAGGA ATTCGAGCGG
GAGGCGACGT CGCTTCGGTC CTATCAGTCC GTTGTGCTGC CGGGCTTGTT GCAGACCGAG
GCCTACGCAC GTGCGGTGCT GTCCAGTGGG GGAATGCGGG GACGCACCGA GGTTGACCGG
CTGCTAGCCA CCCGACTGTC GCGTCAGGCC ATCCTCACCA AGGAGGACCC ACCGCAGTTC
GTGGCCGTGG TCGACGAGGT CGCCCTCCGA CGCCCGGTCG GTGGCCGGGA GACGATGCGC
CAGCAGGCAC ACGCCCTGCT GGCAGCCTGC GAGGCCCCAC ACGTCCGGAT GCACGTCGTT
CCCTTGACCG TCGGCGCCTA CGCGGGTCTG AACGGACCGT TCGTCATCGG GACCGGCCCG
GATCATCGGA TGGCGGTCTA CCTGGACAGC CAGCTGGAGG GGGAGATGGT TAGCACCCCG
AATGACGTAG CGGCGATACT GGCGGCGTGG GAGAACGTGC GCGGCGAGGC GCTGTCCCAC
TGGCAGTCAG TTGATCTTCT CAGGGAAGTA GCTGAATCAT GGACTTGA
 
Protein sequence
MNEALRLAMN EAGHTAQTLA ERVGVDRKTT TRWLVKDHIP HPAHRTAAAD ALGVDKEDIW 
PDTSRRRNPV WFRPWQEFER EATSLRSYQS VVLPGLLQTE AYARAVLSSG GMRGRTEVDR
LLATRLSRQA ILTKEDPPQF VAVVDEVALR RPVGGRETMR QQAHALLAAC EAPHVRMHVV
PLTVGAYAGL NGPFVIGTGP DHRMAVYLDS QLEGEMVSTP NDVAAILAAW ENVRGEALSH
WQSVDLLREV AESWT