Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0087 |
Symbol | |
ID | 5056520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 95005 |
End bp | 95730 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640472354 |
Product | rare lipoprotein A |
Protein accession | YP_001156950 |
Protein GI | 145592653 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCACAT TGACTTCGGA TGTGCTTCGC TCGCTACGGT CCGACCCGGT TTGTTCAGTG GACGAAAGGA CCGGGCCGGT GGCCGGCAGA CACGCGCGTA CCCGAAGGGT CTCCCCGACC GGCGTCGCGG CAACCGCGGC GATCGGTGTC GTGCTCGCGA TCGGTGGGAC CGTGGGCACC GTCCGGCTTA CCTCCGGTAA CGAGTCCGAC CGGTCTGTCA CGGTCGCGCC GACCACGGTT GACTCTCCGG CCACCGCACC CACCACCGCA CCCGCCACAC CCTCCGCGTC GCCCAGCGTC TCACCGAGTT CCAGCGCCCG GTCGGCTCCG GCCGCGAGCC CCACGCCGGC CCGGAACACC CAGGTGCCAT CCCGGAGTAA GCCGAGATCC ACGACGCCGC AGCCGACCGC GACGAAGTCG ACCAGCCCCG CTCCGACGGT GATGGAGACC GGGTCCTGCG GCGCCTCCTA CTACTCCGAG GGGCAGCTGA CGGCGAGCGG GGAATCCTTC GACCCGTCGG CGATGACCGC CGCCCACAAG ACCCTGCCGT TTGACACGAT GGTGCGGGTC ACCAACCCGG TTACCAGTAC GTCGGTGACG GTGCGGATCA ATGACCGGGG CCCGTTCATC ACCGGGCGCT GCATCGACCT GTCCCAGGCG GCCTTCGCGG TGATCGCCCC CCTGAGCGCG GGGCACGTCG AGGTTCGGTA CGAGGTGTTG GGCTGA
|
Protein sequence | MITLTSDVLR SLRSDPVCSV DERTGPVAGR HARTRRVSPT GVAATAAIGV VLAIGGTVGT VRLTSGNESD RSVTVAPTTV DSPATAPTTA PATPSASPSV SPSSSARSAP AASPTPARNT QVPSRSKPRS TTPQPTATKS TSPAPTVMET GSCGASYYSE GQLTASGESF DPSAMTAAHK TLPFDTMVRV TNPVTSTSVT VRINDRGPFI TGRCIDLSQA AFAVIAPLSA GHVEVRYEVL G
|
| |