Gene Strop_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0087 
Symbol 
ID5056520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp95005 
End bp95730 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content69% 
IMG OID640472354 
Productrare lipoprotein A 
Protein accessionYP_001156950 
Protein GI145592653 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACAT TGACTTCGGA TGTGCTTCGC TCGCTACGGT CCGACCCGGT TTGTTCAGTG 
GACGAAAGGA CCGGGCCGGT GGCCGGCAGA CACGCGCGTA CCCGAAGGGT CTCCCCGACC
GGCGTCGCGG CAACCGCGGC GATCGGTGTC GTGCTCGCGA TCGGTGGGAC CGTGGGCACC
GTCCGGCTTA CCTCCGGTAA CGAGTCCGAC CGGTCTGTCA CGGTCGCGCC GACCACGGTT
GACTCTCCGG CCACCGCACC CACCACCGCA CCCGCCACAC CCTCCGCGTC GCCCAGCGTC
TCACCGAGTT CCAGCGCCCG GTCGGCTCCG GCCGCGAGCC CCACGCCGGC CCGGAACACC
CAGGTGCCAT CCCGGAGTAA GCCGAGATCC ACGACGCCGC AGCCGACCGC GACGAAGTCG
ACCAGCCCCG CTCCGACGGT GATGGAGACC GGGTCCTGCG GCGCCTCCTA CTACTCCGAG
GGGCAGCTGA CGGCGAGCGG GGAATCCTTC GACCCGTCGG CGATGACCGC CGCCCACAAG
ACCCTGCCGT TTGACACGAT GGTGCGGGTC ACCAACCCGG TTACCAGTAC GTCGGTGACG
GTGCGGATCA ATGACCGGGG CCCGTTCATC ACCGGGCGCT GCATCGACCT GTCCCAGGCG
GCCTTCGCGG TGATCGCCCC CCTGAGCGCG GGGCACGTCG AGGTTCGGTA CGAGGTGTTG
GGCTGA
 
Protein sequence
MITLTSDVLR SLRSDPVCSV DERTGPVAGR HARTRRVSPT GVAATAAIGV VLAIGGTVGT 
VRLTSGNESD RSVTVAPTTV DSPATAPTTA PATPSASPSV SPSSSARSAP AASPTPARNT
QVPSRSKPRS TTPQPTATKS TSPAPTVMET GSCGASYYSE GQLTASGESF DPSAMTAAHK
TLPFDTMVRV TNPVTSTSVT VRINDRGPFI TGRCIDLSQA AFAVIAPLSA GHVEVRYEVL
G