Gene Sterm_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3019 
Symbol 
ID8598473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp3159403 
End bp3160146 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content37% 
IMG OID 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003309792 
Protein GI269121615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.179056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCA GGGAAGAATT CACATGTCCT CTGGAATTGG CAACTGATCT GATATCTGCC 
AAATGGAAGA CGATAATTTT GTGGGAACTG AGCAGCGGGA CAAAAAGGCT CAAGGATTTA 
AGAAAAATAA AAAATATAAA TGAAAAAATG CTGCTGCAGC ATCTGAATGA GCTGATAGAT 
GCAGGTATAA TTGCTAAGAA GGATTATAAT ACCTATCCTT TGAGGACAGA TTACTATCTC 
ACGGAATTAG GCGAGAAATT ACTTCCCACA CTGGAAGCCC TGCAGGAATT CGGAAAAGAG 
TTTATAAAAC AAGGAGGCAG CAGTATGGAA GAAGAAATAA AATTAAAATC TCTGGAACTA 
ATAAAAAAAA GCAGTGTGTC AATCATAGGA TCAGTAAGCA GCGACGGATT TCCTGATATA 
AAGGCAATGC TTGCACCACG GGAAATAAAT GGTTTGAAGG AAATATTTTT TACTACGAAT 
ACCTCCTCAA TGCGGGTAGG GCAGTATAGA GAAAATCCCA GAGCCAGTCT GTATTTCTAT 
AATGACAGAT TATTTATAGG CGTTCTGCTT GAAGGAAATA TGGAGGTACT AACGGACAGT 
GATACAAAAA AGCGTATATG GCGGGACGGA GATACTCTTT ACTATAAAAA AGGAGTAGAT 
GATGAAGATT ACTGTGTTTT ACGTTTTACT GCAAAATCCG GAAGGCTTTA TGAAAATTTT 
TCATCTGTGA GTTTTGAAAT TTAG
 
Protein sequence
MKLREEFTCP LELATDLISA KWKTIILWEL SSGTKRLKDL RKIKNINEKM LLQHLNELID 
AGIIAKKDYN TYPLRTDYYL TELGEKLLPT LEALQEFGKE FIKQGGSSME EEIKLKSLEL 
IKKSSVSIIG SVSSDGFPDI KAMLAPREIN GLKEIFFTTN TSSMRVGQYR ENPRASLYFY 
NDRLFIGVLL EGNMEVLTDS DTKKRIWRDG DTLYYKKGVD DEDYCVLRFT AKSGRLYENF 
SSVSFEI