Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1547 |
Symbol | |
ID | 8597017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1646962 |
End bp | 1648941 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | transketolase |
Protein accession | YP_003308337 |
Protein GI | 269120160 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.45317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA ATGTAAAACA ATTGTCAGTA GATGCAATAA GAATGCTGGG AGTGGATGCG ATAGAGAAGT CAAAGTCAGG ACATCCGGGA ATAGTATTAG GTGCGGCACC TATGGCGTAC ACACTTTGGA GCGAACACCT TAACGTGAAT CCAAAAGAAC CTGAATGGCT GAACAGAGAC AGATTTGTAC TGTCAGCTGG ACACGGATCG ATGTTAATAT ATTCATTATT ACATTTAAGC GGTTTTGATG TGTCTATGGA AGACATAAAG AATTTCAGAC AGTGGGGCTC TAAGACACCG GGACATCCTG AGTTCGGACA TACAAAAGGA GTGGACACGA CAACAGGTCC CCTTGGACAG GGAATCGCCA CAGCGGTGGG AATGGCACTG GCAGAAACAC ATCTTGCGAA AAAATATAAT AAAGAAGATA TGAATATAAT AGATCACTTT ACATATGTAA TCTGCGGAGA CGGAGATCTT ATGGAAGGTG TGAGCGGAGA GGCAAGTTCA TTTGCAGGAG TACAGAAGCT GGGGAAGCTG GTAGTACTTT ATGATTCCAA TGATATATGT CTTGACGGTG AAACAAGAGA AACATTTACA GAAGATGTGG CTAAGAGATA TGAAGCTTAC GGCTGGCAAG TACTAACGGT AAAAGACGGC AATGATCTTG GAGCAATAGA TGCGGCAATA AAAGAAGCAA AGAAAGATGT AACAAAGCCG ACATTAATAG AGATAAAAAC AGTAATAGGA TACGGAGCAC CAACAAAAGC AGGAAAGAAC AGTTCACACG GGGCACCTTT GGGAGCAGAG GAAACAAAAG GATTAAGAGA ATATCTGAAA TGGGACTATG AAGCATTTGA AGTTCCGGCA GAGGTATATG AGGACTATAA GAAATCAGTA GCAGAAAGAG GAGCGGCAAA GTCAGAGGAA TGGAAAGCCC TTGTAGGAAA GTATAAGGAA AAATATCCTG AGCTGGGAAA AGAGATAGAA GAAATAGCAG CAGGAACATT ATTTGATAAT ATAAAGATAG AATTCCCGGC ATATGAAGCA GGACATTCAC AGGCAACAAG AAATGCATCA AATGATGCGA TAAATGCAAT AGCAGGACAG ATACCGAATT TCATAGGAGG CTCGGCAGAC TTAGCACATT CAAATATGAC AATGATAAAA GGAGAAGGAC TGTTTGACGC AGAGCACAGA GAAAACAGAA ATATTCAGTT TGGAGTAAGA GAATTTGCAA TGGGAGCGAT ACTGAACGGA ATGGTATTAC ACGGAGGACT GAAGACATTC GGGGGAACAT TCTTTGTATT CAGTGACTAT GTGAAGGCAG CAATAAGATT ATCAGCATTA ATGGGATTAC CGGTAACTTA TGTACTTACC CATGACAGTA TAGCAGTAGG AGAAGACGGT CCGACACATG AACCGATAGA ACAGCTTGCA GGTTTAAGAG CAATTCCGAA CATAAATGTA ATAAGACCAG CAGACAGCAG AGAAACACAG GGAGCATGGA AGGTAGCTGC AGAAAGTAAG AAGACACCGA CACTTTTAGT ATTAAGCAGA CAGAATCTGG ATGTAACAGA AGGTTCGTCA ATGGAAGATG TAGCAAAGGG AGCATATGTA TCTTACGAGA CAAACAAAGA TTTTGGAAGA ATAATAATAG CAACAGGATC AGAAGTATCT CTGGCAGTGG GAGCAGCAAA GGAACTGGAA AAATCAGGAG AATCAGTAAG GGTAGTAAGT ATGCCGAGTA TGGAGCTTTT TGAAAGACAG AGCTGTGAGT ATAAGGAAAG TATCCTTCCA AAAGGAGTAA GAAGCAGAGT ATCACTTGAG ATGGGATCGA CATTCGGATG GCATAAATAT GTAGGAATGG ACGGACTGGC AATAGGAATA GATACATTCG GAGCATCAGC ACCGGCAGGA AAAGTAATAG AAGAATACGG ATTTACAGTA GAAAAAATCG TTAATAAAAT AAAAGGATAA
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Protein sequence | MEKNVKQLSV DAIRMLGVDA IEKSKSGHPG IVLGAAPMAY TLWSEHLNVN PKEPEWLNRD RFVLSAGHGS MLIYSLLHLS GFDVSMEDIK NFRQWGSKTP GHPEFGHTKG VDTTTGPLGQ GIATAVGMAL AETHLAKKYN KEDMNIIDHF TYVICGDGDL MEGVSGEASS FAGVQKLGKL VVLYDSNDIC LDGETRETFT EDVAKRYEAY GWQVLTVKDG NDLGAIDAAI KEAKKDVTKP TLIEIKTVIG YGAPTKAGKN SSHGAPLGAE ETKGLREYLK WDYEAFEVPA EVYEDYKKSV AERGAAKSEE WKALVGKYKE KYPELGKEIE EIAAGTLFDN IKIEFPAYEA GHSQATRNAS NDAINAIAGQ IPNFIGGSAD LAHSNMTMIK GEGLFDAEHR ENRNIQFGVR EFAMGAILNG MVLHGGLKTF GGTFFVFSDY VKAAIRLSAL MGLPVTYVLT HDSIAVGEDG PTHEPIEQLA GLRAIPNINV IRPADSRETQ GAWKVAAESK KTPTLLVLSR QNLDVTEGSS MEDVAKGAYV SYETNKDFGR IIIATGSEVS LAVGAAKELE KSGESVRVVS MPSMELFERQ SCEYKESILP KGVRSRVSLE MGSTFGWHKY VGMDGLAIGI DTFGASAPAG KVIEEYGFTV EKIVNKIKG
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