Gene Sterm_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0817 
Symbol 
ID8596300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp888646 
End bp889371 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content30% 
IMG OID 
Productphage regulatory protein, Rha family 
Protein accessionYP_003307620 
Protein GI269119443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.426302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTG AGAATAAAGA AACTATAACA AGTCTAGAAG TAGCCGAGTT AACGAATAAA 
GAACATAAAA ATATTTTAGC TGATATTAGA GATGAGGTCA GTAAATTAGG GGAAGATAGA 
AGTCGGCTAA TTTTTCAGCC GATTGAATAT CTGGACAATA GAAATAGAAA ACAACCTGCA 
TTTAACATAA CTTTAGACGG GGTTTTACAA TTAGGTGCAA GATATGATGC GATAATTAGA 
TTTAACTTAA TACAAAAAGT CAATGAACTA CAAAATAAAA TAAAAGCTCC TGTTACCATG 
AAAGAAGCTT TGTTATTAGC ATTAGAACAA CAAGAGAAAA TTGAAGCACT TGAATTAAAA 
GTCATTGAAG ATATGCCCAA AGTTGAATTT TACGACGAAG TAACTGGAAG CAAAACTACT 
TTCACTATGG ATAAAGTAGC TAAAATACTG AATTTTAAAA AAATCGGTCG AAACACTTTG 
TTTGATATCT TGAGAAAAAA CGAGATATTA AGAAGTGATA ACACTCCTTA TCAGTCGTAT 
GTTGATCGTG GTTGGTTCAG ATTAATAGAA AGTAAGTTTA CAAAACTTGA CGGAGAAACT 
TGTATAACTT ATAAAACTGT AGTTTACCAA AAGGGAGTTG ATGGTATCTT GAAATTATTA 
CTGAACTTAG GATACAAGAA AAATTCTCCA GAAAATACTT TTACTGTATC AAATATAGCT 
AATTAA
 
Protein sequence
MRIENKETIT SLEVAELTNK EHKNILADIR DEVSKLGEDR SRLIFQPIEY LDNRNRKQPA 
FNITLDGVLQ LGARYDAIIR FNLIQKVNEL QNKIKAPVTM KEALLLALEQ QEKIEALELK 
VIEDMPKVEF YDEVTGSKTT FTMDKVAKIL NFKKIGRNTL FDILRKNEIL RSDNTPYQSY 
VDRGWFRLIE SKFTKLDGET CITYKTVVYQ KGVDGILKLL LNLGYKKNSP ENTFTVSNIA 
N