Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_0540 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | + |
Start bp | 487580 |
End bp | 489139 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | amino acid permease-associated region |
Protein accession | ACX90816 |
Protein GI | 261601213 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAGT CTAAAAAGGG AGCATTCTTA AGGGAATCAT CTGGATTAGT AAGAGAATTT GGTATCCTAG ACGCCCTATG GTTTAATATA GCTTTACTTG GTTTGCTATT TTCAACATAT TACGTTGCCT CCACTGGACC TCTAGTTGGT GGAAATCCTT TATTAGGTTT ACTACTACCT ATAGTTGGAT TTTTCCTAGT GGGAATTATA TTTTCATACG TTGGCTCTAA GGTTCCTAGA GTTGCAGCTG ATTATGTTTA TGTGAGTAGA AATTTGCATC CCGCACTAGG TTTCGTAGGT AACGCTGGAT ACTTTTTGGC TACTGTACCC TTATTTATGG GAATAACTGG AATAACACTA CAAACATTTG GTCTAATACC CTTACTAACA ATCTTAGGCT ACTATACTCA TAATCCTTCT CTGATAGTAG TAGGCTCGCA AATAGATAGT AATCCATATT TGATAATGGT GATAGGTGCA GTTGAGATAG TTATCATGTC CTTAATTCCG ATCTTTGGAA ATAAAGTATA TAGAGCTTTC CAATGGATAG CAATACCTTT AGCTTTAATA GCTGCTATAG GAATGATAAT AGTAGAGGCA TCAGTTCCGC ACTCTTTAGC AATAGCTAGA TTAAACAACT TTGCGTCGGT TTATGCAAAT GTATCAAACC TATATGCAAA TGTAACGTCA TCTAATGCTC CAGTTCCCGC TTATTATAAT ATCTATAACA TTATTTCATT AAATCCAGTT TACGTAGTAG GATTCTCCTA TATAATTAAC ACTATCTATG TAGCAGGTGA AGTAAGGAAT CCAAAAAGAA GTATGCCAAT AAGTATCTTA GGAACACTGA TTATAACTGG GTTCATATTT ACGGCTGCGT TAGCCCTTGA ATATAACCAG TTTGGATACG ACTTTACCAC TAAAATGATG TATCTAAGTA TAGTTCAAGG TACTCTGCCA ATACCGACTC CATATCTAGA TTTACTGGAG GGCATAGCAA GTGGGAACAT CGTATTGGGT GTACTCTTTG CCTTAGCTAG TATAGTACAA CTACTAATGT ACTTATCTGC AGCGTCTTTC GTAGGAAGTA GATTACTATT CTCTTACGCT ATGGATAGAA TTATGCCAGA TTTTGTAGGC GATGTTAGCG AAAAAAGGCA TGTTCCCATT AAGGCAATAA TCCTTTCAAT GATAGCTGGA CTCATTGGGT TAACAGTGTT TACATTACCT GTCACCTCAG CGGGAGCGTT TTTACTCTCT AGTGTTGCCG TTGCAATACT AATGCTATTT CCGATGGCAA TATTATCAAT AGCAGTACTG AAGACGGAGA AGAATGAAAA CAAGATAAGA ATTATTGCTG CGTTATCTAT AATTTATCTA ATTTACACAT TTTATCAGTA TCTAACCGTC CCCGCTATAG GTGCAGATTC CATAGTAGGC TATGGCATAC TCGCTGGTTC AATAGTAATA TTGTTTATAA TATTCTATGT GGCTAAATTT ATAAGAGCTC GTCAAGGAAT TGATTTCAAC CTAATTTTCA AGGAGATTCC TCCTGAGTGA
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Protein sequence | MEKSKKGAFL RESSGLVREF GILDALWFNI ALLGLLFSTY YVASTGPLVG GNPLLGLLLP IVGFFLVGII FSYVGSKVPR VAADYVYVSR NLHPALGFVG NAGYFLATVP LFMGITGITL QTFGLIPLLT ILGYYTHNPS LIVVGSQIDS NPYLIMVIGA VEIVIMSLIP IFGNKVYRAF QWIAIPLALI AAIGMIIVEA SVPHSLAIAR LNNFASVYAN VSNLYANVTS SNAPVPAYYN IYNIISLNPV YVVGFSYIIN TIYVAGEVRN PKRSMPISIL GTLIITGFIF TAALALEYNQ FGYDFTTKMM YLSIVQGTLP IPTPYLDLLE GIASGNIVLG VLFALASIVQ LLMYLSAASF VGSRLLFSYA MDRIMPDFVG DVSEKRHVPI KAIILSMIAG LIGLTVFTLP VTSAGAFLLS SVAVAILMLF PMAILSIAVL KTEKNENKIR IIAALSIIYL IYTFYQYLTV PAIGADSIVG YGILAGSIVI LFIIFYVAKF IRARQGIDFN LIFKEIPPE
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