Gene Ssol_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0540 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp487580 
End bp489139 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content37% 
IMG OID 
Productamino acid permease-associated region 
Protein accessionACX90816 
Protein GI261601213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAGT CTAAAAAGGG AGCATTCTTA AGGGAATCAT CTGGATTAGT AAGAGAATTT 
GGTATCCTAG ACGCCCTATG GTTTAATATA GCTTTACTTG GTTTGCTATT TTCAACATAT
TACGTTGCCT CCACTGGACC TCTAGTTGGT GGAAATCCTT TATTAGGTTT ACTACTACCT
ATAGTTGGAT TTTTCCTAGT GGGAATTATA TTTTCATACG TTGGCTCTAA GGTTCCTAGA
GTTGCAGCTG ATTATGTTTA TGTGAGTAGA AATTTGCATC CCGCACTAGG TTTCGTAGGT
AACGCTGGAT ACTTTTTGGC TACTGTACCC TTATTTATGG GAATAACTGG AATAACACTA
CAAACATTTG GTCTAATACC CTTACTAACA ATCTTAGGCT ACTATACTCA TAATCCTTCT
CTGATAGTAG TAGGCTCGCA AATAGATAGT AATCCATATT TGATAATGGT GATAGGTGCA
GTTGAGATAG TTATCATGTC CTTAATTCCG ATCTTTGGAA ATAAAGTATA TAGAGCTTTC
CAATGGATAG CAATACCTTT AGCTTTAATA GCTGCTATAG GAATGATAAT AGTAGAGGCA
TCAGTTCCGC ACTCTTTAGC AATAGCTAGA TTAAACAACT TTGCGTCGGT TTATGCAAAT
GTATCAAACC TATATGCAAA TGTAACGTCA TCTAATGCTC CAGTTCCCGC TTATTATAAT
ATCTATAACA TTATTTCATT AAATCCAGTT TACGTAGTAG GATTCTCCTA TATAATTAAC
ACTATCTATG TAGCAGGTGA AGTAAGGAAT CCAAAAAGAA GTATGCCAAT AAGTATCTTA
GGAACACTGA TTATAACTGG GTTCATATTT ACGGCTGCGT TAGCCCTTGA ATATAACCAG
TTTGGATACG ACTTTACCAC TAAAATGATG TATCTAAGTA TAGTTCAAGG TACTCTGCCA
ATACCGACTC CATATCTAGA TTTACTGGAG GGCATAGCAA GTGGGAACAT CGTATTGGGT
GTACTCTTTG CCTTAGCTAG TATAGTACAA CTACTAATGT ACTTATCTGC AGCGTCTTTC
GTAGGAAGTA GATTACTATT CTCTTACGCT ATGGATAGAA TTATGCCAGA TTTTGTAGGC
GATGTTAGCG AAAAAAGGCA TGTTCCCATT AAGGCAATAA TCCTTTCAAT GATAGCTGGA
CTCATTGGGT TAACAGTGTT TACATTACCT GTCACCTCAG CGGGAGCGTT TTTACTCTCT
AGTGTTGCCG TTGCAATACT AATGCTATTT CCGATGGCAA TATTATCAAT AGCAGTACTG
AAGACGGAGA AGAATGAAAA CAAGATAAGA ATTATTGCTG CGTTATCTAT AATTTATCTA
ATTTACACAT TTTATCAGTA TCTAACCGTC CCCGCTATAG GTGCAGATTC CATAGTAGGC
TATGGCATAC TCGCTGGTTC AATAGTAATA TTGTTTATAA TATTCTATGT GGCTAAATTT
ATAAGAGCTC GTCAAGGAAT TGATTTCAAC CTAATTTTCA AGGAGATTCC TCCTGAGTGA
 
Protein sequence
MEKSKKGAFL RESSGLVREF GILDALWFNI ALLGLLFSTY YVASTGPLVG GNPLLGLLLP 
IVGFFLVGII FSYVGSKVPR VAADYVYVSR NLHPALGFVG NAGYFLATVP LFMGITGITL
QTFGLIPLLT ILGYYTHNPS LIVVGSQIDS NPYLIMVIGA VEIVIMSLIP IFGNKVYRAF
QWIAIPLALI AAIGMIIVEA SVPHSLAIAR LNNFASVYAN VSNLYANVTS SNAPVPAYYN
IYNIISLNPV YVVGFSYIIN TIYVAGEVRN PKRSMPISIL GTLIITGFIF TAALALEYNQ
FGYDFTTKMM YLSIVQGTLP IPTPYLDLLE GIASGNIVLG VLFALASIVQ LLMYLSAASF
VGSRLLFSYA MDRIMPDFVG DVSEKRHVPI KAIILSMIAG LIGLTVFTLP VTSAGAFLLS
SVAVAILMLF PMAILSIAVL KTEKNENKIR IIAALSIIYL IYTFYQYLTV PAIGADSIVG
YGILAGSIVI LFIIFYVAKF IRARQGIDFN LIFKEIPPE