Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4430 |
Symbol | |
ID | 5611666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 5414852 |
End bp | 5415265 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640935400 |
Product | flagellar basal body-associated protein FliL-like protein |
Protein accession | YP_001476160 |
Protein GI | 157377560 |
COG category | [N] Cell motility |
COG ID | [COG1580] Flagellar basal body-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000303326 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAATTC AAAAATTAGC ATCGCTACTG CTTATTTTAG TCGCGACCGT TTTCAGCTTT GGTGCTTATG CCGAAGACGG AGATATTGTA GATAACTACG CCTATTATGG CTTCGAACCC GATCTCATCA CCAATTATAT CTCTACCGGT AAGAAGATGG GCTTTGTACG CATCGGTATC GAGCTGATGG TGAAAGATCC CGACGACCTG ATCGCCCTCG AGCATCATGA TCCTCTGTTG CGTGCCGCCA TTCTGGAGAT CATGGGAAGC CAGACCGCCG ATAAGGTTAA ATCACTGACC GGACGCGAAG AGATCAGACG TGAATGCTAT GACACAGTCA ATCGTCTTAT CGAACGGGAA ACCGGCAAGG CCATTATCGT CAACCTGCTT TTCACTAAGT ATCTCTACGA TTAG
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Protein sequence | MKIQKLASLL LILVATVFSF GAYAEDGDIV DNYAYYGFEP DLITNYISTG KKMGFVRIGI ELMVKDPDDL IALEHHDPLL RAAILEIMGS QTADKVKSLT GREEIRRECY DTVNRLIERE TGKAIIVNLL FTKYLYD
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