| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4199 |
|---|
| Symbol | |
|---|
| ID | 5611945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | + |
|---|
| Start bp | 5156798 |
|---|
| End bp | 5157190 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640935158 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001475931 |
|---|
| Protein GI | 157377331 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGC ATGAACTACT CAGTGGCAAA TTATTACGTG AGTACAACAC CATCCTTGCT
ATGGTTGAGA TCTACTGTAA AGCGCATCAT CAAAGTAAGG CGTCGGAGTG TCAGGAGTGT
CAGGAATTTC TCGAGTACGC CCACACACGC TTAGACAGAT GTCCCTATGG TCAGATTAAA
CCTACCTGTA ATAAATGCCC GGTACATTGC TACAAGCCTC ATATGAAGGC AAAGGCGAGA
GAGATCATGG TTTTTTCGGG GCCTAAGATG CTGCTGCCAC ACCCCATCAT GGCTATTCGG
CACCTGTTTT CTGAACGGAC CCCTGTACCT GAGACGGTAC CGGTCGAATT TTCTAATCGA
CATATTCGAA AAAACAGAAA AAATCACGCC TAA
|
|---|
| Protein sequence | MAEHELLSGK LLREYNTILA MVEIYCKAHH QSKASECQEC QEFLEYAHTR LDRCPYGQIK
PTCNKCPVHC YKPHMKAKAR EIMVFSGPKM LLPHPIMAIR HLFSERTPVP ETVPVEFSNR
HIRKNRKNHA
|
|---|
| |