| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3989 |
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| Symbol | |
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| ID | 5613520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4881722 |
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| End bp | 4883143 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934943 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475721 |
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| Protein GI | 157377121 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5361] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAA GCCATTTAGC TAAAGTCGTA CTGGCTATCG CCATTGCAAC GTCACCAGTT
TGTTATGCAG AGCAAAGTTC GCAAAATACT CAGTCAGAAC AGACGTTAAC CATCCAACAA
AGTTTACTCG GTGAAACCTA CAGCTTAGGT GTAAATGCCT ATCTGTGGGG TTCAGCATTG
GTAAGAATGG AGCAGATCTC CCGCCAATAT ACCGACATCA GCTCGCCTCA AGCAGATACC
AGTTATCGCG CTCCCTTAAA CGAGTTTGGA CACGCCAGAA GACTCAGTTC ACCAGCAGAC
AAAGACATGC CAACGGCGAA CCGGGATACC TTGTACTCGA GTGCAGTATT GGACGTTTCT
GAGGAGCCAA TCGTACTATC CGTGCCAGAT GTTGAAGATA GATACTTTGT CATCAACATG
TTTGATATGT GGCACAACCT ATTTCAATAC GTTGGTACTC GTGAAACTGG CAGCCTCGCT
AAAGAGTTCC TAATCGTGCC ACCGGGCTGG AAAGGGGAAG CGCCTCGCAA CACTAAAGTG
ATCGAAGCAC CGACAGACAA AGTCTGGTTA TGGGGCCGTA CACAGGTCTT AGGTGAGCAA
GACTATGCCA ATGTACATGC CGTACAAGAC AAATATGAGA TCACACCATT AAGCGAGTAT
TTAGGTCGAC CAGCCAAGCA AGTCGCTACC GAACTTAGCG CGCGCCCAGG GCAAGAGGAG
GATGCGCTAC GCTTCTTCAC TGAGCTGGCG GAGTATGTCA AACAAAACCC GCTTGATGAG
CGCCAACAGG CACTCTTTGG TCAGTTTGAA AAGATTGGTT TAACTAAGCA AGGTTTTGAC
GCCACTAAAC TATCTCCTGA AATGCAGCAG GTGTTGGTGC AAGCCATGAC TGATGCCCAG
CAGATTATCA GTGCTCAAGT GGCGAACCCG AACACGCTGG AAGTCAAAGA TGGCTGGTTC
TACGCGTTTG AGCTCGATGA TTTCGGTGAT GACAACGCCT TAAGATCACT GGTTGCCGGA
CCATACCTTG GTGGGCAAGG TCCAAACGAA GCTATCTACC CAATTACCTA CACCGACGGT
AAAGGCAAGC CTCTTAATGG TGGTCAAGGC TACAAGATGA GCTTTGATAA AGCCCCACCA
GTAGGTGCTT TTTGGTCACT GACGGTATAC GACGCCAAAA CCAAACTCTT GGTCAGTAAT
GAGATAAAGC GTTACAGCGT CAATAACCTC ACCGATCTCG ATAAAAACGC CGATGGCTCA
TTCGACATCC ATCTACAGCA TGACAACCCC GCAGGAAACA AATCCGCTAA CTGGTTACCG
ACGCCAGAAG GCAATTTCTA TGTACTCGCC AGGCTCTACA TTCCATCGAA AGAGATCCTT
GAGATGAAGT GGACAGTCCC TGCGATCCAA AACCTTAAAT AA
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| Protein sequence | MIKSHLAKVV LAIAIATSPV CYAEQSSQNT QSEQTLTIQQ SLLGETYSLG VNAYLWGSAL
VRMEQISRQY TDISSPQADT SYRAPLNEFG HARRLSSPAD KDMPTANRDT LYSSAVLDVS
EEPIVLSVPD VEDRYFVINM FDMWHNLFQY VGTRETGSLA KEFLIVPPGW KGEAPRNTKV
IEAPTDKVWL WGRTQVLGEQ DYANVHAVQD KYEITPLSEY LGRPAKQVAT ELSARPGQEE
DALRFFTELA EYVKQNPLDE RQQALFGQFE KIGLTKQGFD ATKLSPEMQQ VLVQAMTDAQ
QIISAQVANP NTLEVKDGWF YAFELDDFGD DNALRSLVAG PYLGGQGPNE AIYPITYTDG
KGKPLNGGQG YKMSFDKAPP VGAFWSLTVY DAKTKLLVSN EIKRYSVNNL TDLDKNADGS
FDIHLQHDNP AGNKSANWLP TPEGNFYVLA RLYIPSKEIL EMKWTVPAIQ NLK
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