| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3631 |
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| Symbol | |
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| ID | 5612406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4420518 |
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| End bp | 4422278 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934584 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475363 |
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| Protein GI | 157376763 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0143724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000570457 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATCAT CGAAGTTAAC TATTGGCTTA TTGAGTACAA GCTTATTGGC ACTATCGGGC
TGCAGCCTCA TTCAGGGACC CAAATTGGTC AGTGAGCTTG AGTTTAATGA TCCACAATTT
GCTCACTGCG TGATGCAAAA CGGGCAGGAA GCGCTGGCTC AAATCACAGA ACTTAACTGT
AATAATCTTC AGGTCGGCGC CGTCGATGAA ATTCGCTACA TGCCGGCACT CACTGACCTG
ATCTTACTGG ACAATGACAT ATCCGCAATA GATGTCGGAT CGCAGCCAAA CCTCAAACGC
CTGATCATCG CAGGTAACCG GCTGACGGAT ATAGACCTCA CCAAAAACCC AGAGCTCACC
AGCCTCAACA TCTCAGGCAA CCGGCTCACG CATTTAGACC TTAGCGGTAA CCCTAAGCTC
AAGAGCCTCT ATGCCTACAA GATGCCAATT GCCGAAATCG ATCTCTCTTT GCAGTCAAAA
CTTCGAGATC TGGGCCTGAG CCGTCACAAA CTAACCGGTA TAGATCTGTC ACGTAACCCA
CAACTTCAAA GCTTAAATCT ATCTGTTGGC ACGCTGCCAC AGATTAACCT GTCCCATAAC
CCCAAACTGA GTCATCTGTA CCTCTCCGGC AATAAGCTGA CCCAGTTGGA TCTCGGCGCG
AATCCAAACC TGAAGCTACT GTCGGTCAGA AATAACCAGT TAACCAGCCT GAACCTGAAA
GGCAAGCTGC AACTGAGCCA ATTAAAAGCC GATTACAACC AGATCAGTGA TATCGATTTC
GGTAGCAACT CAGCGTTAAA AGAGGTCGAG TTAAACAATA ACCAACTCAC CAGCTTGGAC
ATCTCAAACC AGACTCAACT CGAAAAGCTG ACCGCCTTCA ATAATCCGCT GCAGAGCCTT
AAGAAAAATG ATGAGCATGA AGTCGCGCTA CTTTCACTCG AAGGTACCCC TTATGCCATC
TCAAAAAAAG AGCTGGAGTC TGAGCAAAAC GACGACAGCG ATATCTCCAA CCTGTTATCA
CCCAGAGTCA GCATCACTGA GGCGGGATTA ATCACCCAGA CAGGTAACCA ATATGATGTA
TTCGGCACTC AGCTGGTCAC CCCGTCTCTG GGACAATACA TAGGTTATCG CTATACGGTC
ACCCTTCCCA AAGACCATAG GGGTAAGGTC GATGCTAAGC TGGCCAGGCA GAATCAGTTT
CCTGTCACAG TGCGCATGAC TCATCCGGAG ATCATCGATC CTAAGACAGG TAAAGGGTTC
ACGACCTCAA GCTGGACAGA CACCATGTTC AAGCACAACC GTAACCTGGC CATGTGGTAC
TTTGGCGATA AAAATGAGTT AGTCACCGGC CGCTGGACCC TGGAGCTTAT TTACCGCGAT
TCAGTCGTGG CGAGAAAGTC ATTTATGTTG GTCAACATGG ATGAAAAACC TCAGCTAAAC
AGCAAACAAG CCAAGGCGGT TAAACAGGGA CTTATGCTGA CAAAACTGGT CACTCAAGGC
GAAGCCGTCC TCTGCGCAGA AACCAAATAC CGCACTTGTC TGGGCTTCGA TTCGGCCAAC
AGCTGCGAGG TTAATCTCAG CCCCTTCAAA GACCAGTGTC AACAGGCCGC GCTCGACTTC
AGTAAGAGAC AGGCCAATAA GGGCAGCTCT GCCGACCAAC TAAGAGGCTA CTTCAGTCAC
TACACGGCTT GCATGGCCAA GAACTACATC AAGACCACCG AGCTGACTCC CCAAGAGGTC
GGCGATTGTC TCGGAAAATA A
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| Protein sequence | MKSSKLTIGL LSTSLLALSG CSLIQGPKLV SELEFNDPQF AHCVMQNGQE ALAQITELNC
NNLQVGAVDE IRYMPALTDL ILLDNDISAI DVGSQPNLKR LIIAGNRLTD IDLTKNPELT
SLNISGNRLT HLDLSGNPKL KSLYAYKMPI AEIDLSLQSK LRDLGLSRHK LTGIDLSRNP
QLQSLNLSVG TLPQINLSHN PKLSHLYLSG NKLTQLDLGA NPNLKLLSVR NNQLTSLNLK
GKLQLSQLKA DYNQISDIDF GSNSALKEVE LNNNQLTSLD ISNQTQLEKL TAFNNPLQSL
KKNDEHEVAL LSLEGTPYAI SKKELESEQN DDSDISNLLS PRVSITEAGL ITQTGNQYDV
FGTQLVTPSL GQYIGYRYTV TLPKDHRGKV DAKLARQNQF PVTVRMTHPE IIDPKTGKGF
TTSSWTDTMF KHNRNLAMWY FGDKNELVTG RWTLELIYRD SVVARKSFML VNMDEKPQLN
SKQAKAVKQG LMLTKLVTQG EAVLCAETKY RTCLGFDSAN SCEVNLSPFK DQCQQAALDF
SKRQANKGSS ADQLRGYFSH YTACMAKNYI KTTELTPQEV GDCLGK
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