| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3585 |
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| Symbol | |
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| ID | 5614012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4369885 |
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| End bp | 4371015 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934538 |
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| Product | ABC transporter inner-membrane translocator |
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| Protein accession | YP_001475317 |
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| Protein GI | 157376717 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGACT CCAAAATTCC GGCGTGGATA AATATCATTG GACTGCCCTT GGTCAATATC
TTCTTCGCCT TTGCATTTTC TGCCATTATT TTCGTTGCCG TGGATGTTAA TCCTCTCGAG
GCGGCGGTCG TGATGGTGAA GGGAGCCTTA GGTTATCAGG AAGGCGTTGG TTATACCCTC
TACTATGCGA CCAACTTTAT CTTTACCGGT TTAGCGGTTG CGGTCGCTTT CTCTGCCGGT
CTGTTTAATA TTGGTGGCGA AGGTCAGGCT TATCTCGGTG GCTTAGGTGT GGGACTCGCC
TGTTTGGGCT TAGATCATGC CTTGCCATTC TGGGCGCTGT TGCCTATCAC TATGGTTGCC
AGTATGGCAT TTGGTGCCCT GTGGGCGCTG ATACCTGCCT ACCTGCAGGC CTATCGTGGC
AGTCATATCG TTATTACTAC TATCATGTTT AACTTTATCG CCTCGGCGCT GATGGTTTAT
CTGATGGTGA ACGTACTTAA GCTAGATGGT CAGATGGCAC CGGTATCGCG GGTGTTTGAA
CAATCAGCGA TAATGCCAAT GTTCCATGAG ATCGCTGCCT GGTTCGGCTG GTCTTTCTCT
GAATCGCCGA TGAACCTGAG TTTCTTTATC GCACTGGCAT GTTGTGTCCT GGTTTGGATA
TTACTCTGGC GCACGCGTTG GGGCTATGCC ATCAGAGCCA TGGGTTCAAG CCCTACAGCT
GCTGAGTATG GCGGCATCAA CCATAAGAAA CTGGTCATCA TAGTGATGCT GATCTCCGGT
GCGCTTTCAG GCATGTTAGG CCTGAACGAA GTACAAGGTT ATGGGCAGCA GTTGAAGCTG
GACTTCGTGG CTGGTTATGG TTTTACCGGT ATTGCCGTGT GTCTGATTGG TCGTAACCAT
CCTGTCGGTA TCATATTGGC GAGTCTGCTC TTTGGTATCC TGTATCAGGG CGGGGCTGAG
TTGGCGTTTG ATTTCCCGAA TATCGACCGT GAGATGATCC AGGTTGTGCA GGCCTTAGTG
GTACTGTTCA GTGGTGCGTT GGCCTTGATG TTAGTGAAGC CAACCGAGCG TATTTTTGTG
TTATGGGATC GAAAGAAAAA GTCCCTCGGC AAAGCACAAG CGGAGGCCTA A
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| Protein sequence | MNDSKIPAWI NIIGLPLVNI FFAFAFSAII FVAVDVNPLE AAVVMVKGAL GYQEGVGYTL
YYATNFIFTG LAVAVAFSAG LFNIGGEGQA YLGGLGVGLA CLGLDHALPF WALLPITMVA
SMAFGALWAL IPAYLQAYRG SHIVITTIMF NFIASALMVY LMVNVLKLDG QMAPVSRVFE
QSAIMPMFHE IAAWFGWSFS ESPMNLSFFI ALACCVLVWI LLWRTRWGYA IRAMGSSPTA
AEYGGINHKK LVIIVMLISG ALSGMLGLNE VQGYGQQLKL DFVAGYGFTG IAVCLIGRNH
PVGIILASLL FGILYQGGAE LAFDFPNIDR EMIQVVQALV VLFSGALALM LVKPTERIFV
LWDRKKKSLG KAQAEA
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