| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3095 |
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| Symbol | |
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| ID | 5610984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3730519 |
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| End bp | 3732303 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934032 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474827 |
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| Protein GI | 157376227 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAT CTGGCTCTAC CCCCTACAGT GATAAAGGCG AAACTTTTTT TTGGCGCACT
GGCGTTGCGA GCATTAAGCT TGGCCAAGAG ACATTCACCC AATTGCATCA AATCGATTTA
GGCATCGACA ACCCGAGAAT TTCATCCATC GGTTCTTGTT TCGCACAGCA TGTGGGCAAG
TGGCTAAATG CGGGAGGTTA CTCATTTAAT CAGAGCAAAA TTGAAACCAA TCAGGTATCC
AGCTTTGCTT TCGGTAATCT ATACACACCA AGATGTCTTC TACAATGGTT TGATATTGCT
GAAACAGAGT CAGGTTTTGA TAAAAGCTGT GCAATCTACT CCGACGCTGA TAAATATTAT
GACCTGTTAA GACCCAACTT TAACCCTGAC GGTTTCAACT CCCAAGCCGA TCTCGTTGCA
GCCAGAATAG CTGCTGCTAC TGAGATGCTC GAAACAATAG CCGTCACAGA TGTACTAATT
TTTACACTAG GTTTAACCGA GGCGTGGAAA GATTGCAGCA ATGTTTTTTA CCCGAGCTGT
CCCGGCATCA TATCCGGTGT CTTCGACGAC TCCCGCTACA GTTTCCATAA CTTTAGCTAT
GAAGAGATCC GCACCGACCT TGAAAAAATA TCGACCCGTC TAAAGACAAT TAATCCTGGT
ATAAAAATAA TTTTAACCGT CTCCCCCGTA CCATTAACTG CAACGGCCAC AGGTAAACAT
ATCATGGTCG CTAACCAGCA TTCAAAATCC ATTCTTCGAA CAGTCGCCGG CTTCATGTGT
GATAATAGAA CTGATTTCCA TTACTTCCCC TCTTACGAGA TCATTACCGT CCCCTGCGCT
GGAGATTTCA GATTTGAGAG TAACCTAAGA TCTGTTACCC CCAAAGCCGT TAACTATGTG
ATGCGCCATT TCGGCTCAGT CCTGGGGGCA CAAACTGAGT CGACTCTGGC TCAAGATCCA
CAGCAAAAGA TTGAGGTGAT CTCATCGGAT AATGATGAAG TCGTCTGCGA TGAAGAGATG
CTCGAAGCCG CAAGTAAGCT ACAAGATAAC CCAATAGAGC AGCCCCTGTC AGACCTCACC
CTGTTTGGTG ATAGCCATAT GGCTAAGCTT TCTAAGTCGC TTATAGACAT GGATGTTCGA
CATTGTGGTG GCATGGTAAT GAATGGTTCA GGCTTCTCTC AAAAGAAGTT TGCACTATGC
GATACCGAAT ACTTTGTACC GCTGGAAAAT GCGGCATCGA GAAAGTTATG GTCGGTGATC
TTCGCTAATT TATCCGGTCA CGAACACAGT GAAGCTCCCA CTAACTCGAC CATTATTACT
AACCTAGGAA TGCAGACTCA TCAGAACATT TCCAGGTTTG CGACTTGGCT GAACATGACC
TACCCGGAAG GAAAATCGGA AGTCTCAACA CAGGAGTTTG TCGATTACTT CAATGAAGAT
CTAACTGAGC AACTCTCAAT ACTACTTAAG CTTCACAATC AAGGTCACAA CGTGATTGTT
GTTTCCGATC CCCCTTTCAG TCAGTACTTT GAAGAGTCGA AATCGATGTC TAACATCATC
TATTCCTACT TTGATGCCAT GGAGTATATC TGGAATGAAT TTGGTATCAG ATTTTTTAAT
GCTGCCACGA CCTTCGATAA AGAGATTTCA GATCCGCAAA GTTATATCTC TGACATAATA
TACGATGATG GTAATCATGA TTGGATACAT GGAAATGAGA AGTACTACTC CTGGCTCGCA
GAAAAACTCA TGCCGCTAGT CAATCAACCA ACTTCAATTA ACTAA
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| Protein sequence | MKRSGSTPYS DKGETFFWRT GVASIKLGQE TFTQLHQIDL GIDNPRISSI GSCFAQHVGK
WLNAGGYSFN QSKIETNQVS SFAFGNLYTP RCLLQWFDIA ETESGFDKSC AIYSDADKYY
DLLRPNFNPD GFNSQADLVA ARIAAATEML ETIAVTDVLI FTLGLTEAWK DCSNVFYPSC
PGIISGVFDD SRYSFHNFSY EEIRTDLEKI STRLKTINPG IKIILTVSPV PLTATATGKH
IMVANQHSKS ILRTVAGFMC DNRTDFHYFP SYEIITVPCA GDFRFESNLR SVTPKAVNYV
MRHFGSVLGA QTESTLAQDP QQKIEVISSD NDEVVCDEEM LEAASKLQDN PIEQPLSDLT
LFGDSHMAKL SKSLIDMDVR HCGGMVMNGS GFSQKKFALC DTEYFVPLEN AASRKLWSVI
FANLSGHEHS EAPTNSTIIT NLGMQTHQNI SRFATWLNMT YPEGKSEVST QEFVDYFNED
LTEQLSILLK LHNQGHNVIV VSDPPFSQYF EESKSMSNII YSYFDAMEYI WNEFGIRFFN
AATTFDKEIS DPQSYISDII YDDGNHDWIH GNEKYYSWLA EKLMPLVNQP TSIN
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