| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3045 |
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| Symbol | |
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| ID | 5612842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3680474 |
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| End bp | 3681589 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933982 |
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| Product | chemotaxis-specific methylesterase |
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| Protein accession | YP_001474777 |
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| Protein GI | 157376177 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0504601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATTA AAGTTCTTGT TGTTGACGAT TCCAGTTTTT TTCGTCGAAG GGTAAGTGAA
ATTGTCACTA AAGATCCAGA GCTAGAGGTA ATTGGTACCG CTTCTAATGG TCTGGAAGCC
GTAAAAATGG CGGCAGAACT TAAGCCACAA GTGATCACTA TGGACATTGA GATGCCCGTA
ATGGATGGCA TCAGTGCCGT CCGTGAAATT ATGGGTAAAA CACCGACGCC AATTTTGATG
TTTTCTTCAT TGACTCAAGA TGGCGCTAAG GCGACGCTTG ACGCGCTAGA AGCTGGGGCA
CTCGATTTTC TTCCTAAACG CTTCGAAGAC ATTGCGACCA ATAAAGATGA GGCGATTCTC
TTACTGCAAC AGAGAATTAA GGCACTTGGA CGTAGACGAA TTTATCGACC TGTAACCCGC
TCTACGACAC CGACGCCTGC TAAATCGACT AAAACGCCGG CATCTCCTCA GTTAGCCCGT
TCGGTGACGC CCGCTCCGGC TCCTGTAAGA GGAACCGTTG TTAAAAGGGC ATCGGGTAAA
AAATATAAAT TATTATTGAT TGGTACTTCC ACCGGTGGGC CTGTGGCCTT GCAGAAGATA
TTGACTCAAC TACCGGCAAA TTATCCCCAT CCTATTTTAT TAATTCAGCA TATGCCGGCA
GCCTTTACTC CAGCATTTGC CAGTCGCTTA AATGGACTTT GTAAAATTCA GGTAAAAGAG
GCACAAAATG GAGACCAATT AAGACCAGGC TCCGCATATC TGGCTCCTGG CGGGATGCAG
ATGATGCTTG AGAGAGGTGG TGCTCATGGT CGGATTAAAA TCGTCGCCGG TAGTGCAGAT
ATGAATTACA AGCCCAGTGT CGATATTACG TTTGCTTCAG CTTCAAAAAT ATCCGGAAGG
GAGACGATGG CAGTGGTCTT AACCGGAATG GGAGCCGATG GAAGAGAAGG GGCCAGAATG
CTTAAGAGTG CCGGTGCTAC TATCTGGGCA CAAGATGAAG CCAGTTGTAT CGTCTATGGT
ATGCCTCAAG CTGTGACTGC CGCCGGGATA TCGAGTCAAT CGATAGCGCT GGATGATATG
GCCGAAGCTA TTTTAAGAGA ATCCAGCCAT GGCTAG
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| Protein sequence | MGIKVLVVDD SSFFRRRVSE IVTKDPELEV IGTASNGLEA VKMAAELKPQ VITMDIEMPV
MDGISAVREI MGKTPTPILM FSSLTQDGAK ATLDALEAGA LDFLPKRFED IATNKDEAIL
LLQQRIKALG RRRIYRPVTR STTPTPAKST KTPASPQLAR SVTPAPAPVR GTVVKRASGK
KYKLLLIGTS TGGPVALQKI LTQLPANYPH PILLIQHMPA AFTPAFASRL NGLCKIQVKE
AQNGDQLRPG SAYLAPGGMQ MMLERGGAHG RIKIVAGSAD MNYKPSVDIT FASASKISGR
ETMAVVLTGM GADGREGARM LKSAGATIWA QDEASCIVYG MPQAVTAAGI SSQSIALDDM
AEAILRESSH G
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