Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2991 |
Symbol | |
ID | 5610503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3622847 |
End bp | 3623749 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640933931 |
Product | glycosyl transferase family protein |
Protein accession | YP_001474726 |
Protein GI | 157376126 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGGTA AACAAATTAC TTTCACAATC CCTTTTTATG AAAATGAGAT CTTACTTAAA AAAACGGTAG AGAGTGTACT GGCGCAATCT ATACCTGATT GGCTTTTAAT CATATCTTTG GACTCTAAAT TATCAAATGA GTTCATTAGC TATCTTAGAA GGCTCAATGA TAATAGGATT TCAGTTATTG AAAATGAAAG CAGCAACAAA GGTATTTGTG GGAATTGGAA TAATTGTATT GATTCAGTTG AATCTGAATA TGTCACAATT CTTCACTCAG ATGATGAGTT GATCCCAAAT TATATTGTTA CAATGCTTGA GGCAATGAAT GAAGCACCTG ACAATGCTTT TTATTTTTGT GCTGTAAAAG TCATCGATAT AAACTCCCAA GCAACTTTTT CGTTTGCTGA CAAAATTAAG AACTATATTA AACCAAACAA TAGTATTGTT AAACTTACTG GTGACAATGG TTTAGCGAGC TTATTAAAGG GCTGTTTTAT TTTTTGCCCT TCAATTTGTT ATAAAACTTC TGTTATTAAA AAGTATAAGT TTCGTGAAAA GTGGAAAATG GTTCTTGATC TAGATTTGTA TGCCCGCTTG CTATTTAATG GTTATAGCAT GTACGGAACT TCTAAGGAAG CCTACCGCTA TAGAAGGCAT GATAATAATC AAACAGCTAA GTTGACTAAA GACTTTAAAC GATTTGATGA GGAGGTTTTA TTGTATGATG ATATATCTAG AAAAGCTAAG AAAAATGGCT GGAAGAACAC TGAACGAGTT GCGAGGAATA AAACTATTAT AAAACTTCAT TTATTGTTTC TGGTGACGAA GTCTGCTTTT TTATTAAACT TTAAGCGCTG CAGGCAAGTG CTAGAATATT TTTTAAGATT GATAAAAATA TGA
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Protein sequence | MQGKQITFTI PFYENEILLK KTVESVLAQS IPDWLLIISL DSKLSNEFIS YLRRLNDNRI SVIENESSNK GICGNWNNCI DSVESEYVTI LHSDDELIPN YIVTMLEAMN EAPDNAFYFC AVKVIDINSQ ATFSFADKIK NYIKPNNSIV KLTGDNGLAS LLKGCFIFCP SICYKTSVIK KYKFREKWKM VLDLDLYARL LFNGYSMYGT SKEAYRYRRH DNNQTAKLTK DFKRFDEEVL LYDDISRKAK KNGWKNTERV ARNKTIIKLH LLFLVTKSAF LLNFKRCRQV LEYFLRLIKI
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